SimpleSearch - Line and FST details


Line specific information

 
Line ID 230E11
Vector Used pAC161
Line Availability available as T3 set from NASC (N422043)
Segregation Analysis 50:4:4
Confirmed for Hit At1g51520
Parent of DUPLO pair none
Parent of pair(s) 2775

Gene hit At1g51520

 
Sequence (A. th genome BLAST matches underlined) 
>85-K014316-022-230-E11-8409
NATTGATCCATGTAGATCTTCCCGTGACATGAAGCCTTTACAATTGAATATACGAGGTAC
AACTATCATGTGTGGAGATGAGACACTTGTGAACCCTCTCGGGATCCGTGCCTCTATGGC
GTAAAACAAGCATCGTTAGCAGAGAAACTCCTCTTGTGAGAATTGGCAAATGGGTCCTCG
TCGTTTGTGAACAGAAAGTTGTTACTGAATTGTTGTTGCTGCTGCTCATCGCCGGAAGAA
GAGGCAAAAAGTGATGAACTTTCACGAAAAGGACTATGGGATCCTCCCTATAGTGAGTAT
GTATAGNAACGGATATGGGTCTTACAAGCTTATTTAAAAAAAAAGGCAACCAAAACCTAC
CACAGTACATGCGTGTAGTTATATATTACACCTAACGTTAGTGTTTATATTTTTTTCACC
TAT
GenBank Accession AL762060 [GenBank]
Graphic View Graphic view of gene At1g51520
Predicted Position of Insertion Chr1:19107356 - go to primer design
BLAST e Value 1e-81
Hit Clone Code (BAC ID) F5D21
Hit Gene Code At1g51520 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RNA-binding (RRM/RBD/RNP motifs) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL762059 [GenBank]


Last Updated on 10.06.2021 13:37