SimpleSearch - Line and FST details
Line specific information
| Line ID | 233H09 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N422365) |
| Segregation Analysis | 50:30:19 |
| Confirmed for Hit | At1g53040 |
| Parent of DUPLO pair | 12771 |
| Parent of pair(s) | none |
Gene hit At1g53040
| Sequence (A. th genome BLAST matches underlined) | >18-K118261-0022-233-H09C-8409 AGTAAACCGATCTACCTTCGTGAACCATACACATGTGAAAAGGTTTGTGATCGGTATGTG TTCTCTTATGATGGTACAACCTTCAGGGACATCTGCCAAACGATTTGAAATGTTTCAATT GTGATCATTGAACAGAAGAAAATTGTGGAACTTTATCATCCTCATATGGTTAAAACCATT ACCACTTGTTATTGGAAGCTTAGCCTCCGTATAAGGTGTTAAACCTTCCTTCTTGTAGAA CTCTACTTGGTAATCTATTGAGGCATTGTCGTACTTTCTTGCGGCCTTATTCGCTTCAGC CTCTACAAACACATCAAAACGTCGGTAATGTCTCGAGATTGCAAAACTAGAATTCGTTCT CCACAAGAACCTGAACATTGAGAAGACAAATAAAGCTAACTGCTTGGAACAAAATATGTT GAAAGAGAGAGACAGAGGAGTCAATTTCTCTACCTTTCAAGGATTTGATATGGATCTACA ACAAGCTGGAGCTTTGCATCAACCCATATAGAGTACCGGACATTTGGGAATAATCTATGC AATAAAAGCTTCGGAACCTGTAAAAATGCATAAACGTTTTACCCAAATCGTATTTGTTAA ATCAGGAAACATTCAAATCTTGGCTATNTATTCTCAATTCTNTTAACCTTTCCATTACGC CGTGCATCGGTATAAGGGACATTATGTACAACAATGATCCTC |
| GenBank Accession | HG968836 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:19764938 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F8L10 |
| Hit Gene Code | At1g53040 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | tRNA (met) cytidine acetyltransferase, putative (DUF616) |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | AL938298 [GenBank] |
Gene hit MXL8
| Sequence (A. th genome BLAST matches underlined) | >72-K014319-022-233-H09-8409 TTGATCCATGTAGATTTCCCTGACATGAANGCCTTTACAATTGAATATATCCGGAAACTC TAATACCCGTATGGATCCTCCCTGAGGAGAGAGCCAACCATAGGTGGTTTGAAAACTCTA TGTAAATGGAAATTNTATAAATAATGCGTACAGGATGTTTGTATCATACGATAAAAGGAT ATATTATTTGAGCTTGAACCGACATACATCAACAACATTCTTATGGCCTGTGACATTCGT AT |
| GenBank Accession | AL938299 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:7475945 - go to primer design |
| BLAST e Value | 9e-33 |
| Hit Clone Code (BAC ID) | MXL8 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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