SimpleSearch - Line and FST details


Line specific information

 
Line ID 234D08
Vector Used pAC161
Line Availability available as T3 set from NASC (N422412)
Segregation Analysis 50:6:5
Confirmed for Hit At5g46190
Parent of DUPLO pair 12196
Parent of pair(s) none

Gene hit At5g46190

 
Sequence (A. th genome BLAST matches underlined) 
>60-K014333-022-234-D08-8409
AGTTTGATCCATGTAGACTTTCCTGACATGAANGCCTTTACAATTGAATATATCCTGATA
TGCAATGACAGAAGGAAGATGAGGTGACCAACGGGATCCCTCCTATGGGAGCCTCCCTAT
AGTGAGAAATTGCCTATGGGATTCTCCCTATGGCGATCGGGGTGCTCACAACTCTGGGAC
ATCCGAACGTACGCGGGCCCCATACACCTAGGGGATGCTTTTTATATGCACACTTGAATA
ATGCGCTCTGCCCCTTATTTTTTTTCCGTGGAAGTGTGCTCCATCTATCTACCTCTGAGG
GGGTGTCTTAGATCGGCCCTCACACGCTTTTCTCCTTCCATC
GenBank Accession AL938364 [GenBank]
Graphic View Graphic view of gene At5g46190
Predicted Position of Insertion Chr5:18723613 - go to primer design
BLAST e Value 4e-04
Hit Clone Code (BAC ID) MCL19
Hit Gene Code At5g46190 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RNA-binding KH domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL938364 [GenBank]


Last Updated on 10.06.2021 13:37