SimpleSearch - Line and FST details


Line specific information

 
Line ID 234F11
Vector Used pAC161
Line Availability available as T3 set from NASC (N422439)
Segregation Analysis N/A (line seemingly not resistant, T2 plants grown without drug)
Confirmed for Hit At5g28380
Parent of DUPLO pair none
Parent of pair(s) 67800, 96787, 96788

Gene hit At5g28380

 
Sequence (A. th genome BLAST matches underlined) 
>86-K014337-022-234-F11-8409
CTGATCCATGTANGATTTCCCGGACATGAAGCACTTTACACTTGAAGTAGGTGGAACACA
AATCTGTTGTTATAATTTATTAAAGTACGGACATACACACATTGACTCAAAGAACATGTT
TCGATTGGCTATGGGATCCTTCCTATAGAGACTTCTGAAACATCAGCAGTAACAGAGATG
AAATATTAGTACCTTTGCCAGGGAATACTTAAGAATGAACGACTCTCCAATGTCCAATAA
TAAACAAGACCTCTATGGGATCCTCC
GenBank Accession AL938399 [GenBank]
Graphic View Graphic view of gene At5g28380
Predicted Position of Insertion Chr5:10339608 - go to primer design
BLAST e Value 2e-49
Hit Clone Code (BAC ID) F21B23
Hit Gene Code At5g28380 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Tetratricopeptide repeat (TPR)-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL938399 [GenBank]


Last Updated on 10.06.2021 13:37