SimpleSearch - Line and FST details


Line specific information

 
Line ID 237C11
Vector Used pAC161
Line Availability available as T3 set from NASC (N422691)
Segregation Analysis 50:40:27
Confirmed for Hit At1g74670
Parent of DUPLO pair none
Parent of pair(s) 1889, 7170, 9140, 90545

Gene hit At1g74670

 
Sequence (A. th genome BLAST matches underlined) 
>83-K014340-022-237-C11-8409
TTTGATCCATGTAGACTTTCCCGGGACATGAAGCCTTTACAATTGATTTTGTCACGGATC
GTCTCTTACAGAACGCATTCGCATGTGGGATAACTCGCTTGGTGCGTCTTGTAGTACCCA
CTGAACATGATCGAAATTACCTTAGATTGAAACACACTAAGTGTCTATGGGATCCTCCCT
ATAGTGAGATGATACTTTGTGCTGCTACATCTCCTTGTGCATTGTCCTCTACATTCTGTA
ATCGTGATAATCGATTTTTTATTTGATATATAATAACAAACAAGATTCATAATAGAAGAA
TAAGTTTTTGCTTACGGTATGATTTCAAACTTCCTGGTCCATACTGTTTAATTTCAAAAC
AAATTTTAACGCGGGTATTAGATTTATAGCAATAACATTGAAAGGGAAAGGCTAAAACAA
TAGAATGAATTATAAAACTCACACTTTGTATTTTACCAAAAAATAAAAACTTACACTTCT
CTGGATGGTACTCACCTTCTTTTGACATAGTGAGACACACGAAAGGGAATAACATTGTGA
GCTAGAAAAAAGAAGTATGAGCTTGGCC
GenBank Accession AL938723 [GenBank]
Graphic View Graphic view of gene At1g74670
Predicted Position of Insertion Chr1:28053888 - go to primer design
BLAST e Value 2e-126
Hit Clone Code (BAC ID) F1M20
Hit Gene Code At1g74670 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Gibberellin-regulated family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit MEE13

 
Sequence (A. th genome BLAST matches underlined) 
>83-K014336-022-237-C11-8409
GATTGATCCATGTAGATCTTCCCTGTACATGAAGCCTTTACAGATGAATAAACTTGTTTG
CTCTAATTAGAGTGCTTACAAAAACAAAATAACTCTAGGAGGTGGGGCTTTATACCCACT
GAACATAAACTAAATTAGGCTTATATTGAAACACATAAGTGCCGTATGGGATCCTTCCTA
TTGCGAGGAATTTTTTTTTAATAGCCTATGGGATCCTCCCTATAGCGAGACGATCGTAAC
CACGATAGTCATTGATCCTTCTACGTTGGCTATTCCTATCATTGTCAACCGCAATTCACC
AAGTGTTGGATGTGGCCACCAACCAATACGGAACGTGAGCTGGGTTTA
GenBank Accession AL938722 [GenBank]
Graphic View Graphic view of sequence AL938722 of line 237C11
Predicted Position of Insertion Chr5:14118539 - go to primer design
BLAST e Value 5e-16
Hit Clone Code (BAC ID) MEE13
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37