SimpleSearch - Line and FST details


Line specific information

 
Line ID 238B07
Vector Used pAC161
Line Availability available as T3 set from NASC (N381362)
Segregation Analysis 50:2:1
Confirmed for Hit At1g76170
Parent of DUPLO pair 595
Parent of pair(s) none

Gene hit At1g76170

 
Sequence (A. th genome BLAST matches underlined) 
>50-K014368-022-238-B07-8409
TTTTGATCCTGTAGATTTCCCGGACTGAAGCACTTACAATTGAAGCATAGCAACTCGTTT
CCTGACTTAAACAACATTACCAACATGACTTGGTGAATCTCTTCCTAAAAACCTCATAGA
AACACTCTCTGCATATCTTTATACAAATACTCACATCATTGATTGCTTATACGTAACAAA
CTCACTATGGGATCCTCCCTATAGTGAGANNGNNNCGTANNNGCCCTNNCGACGGGCGTC
TCNGNNTANAGATTTGCTGAGAGGTGTCCTATGCGGATTTTGAGGACGAGAGGCGCCGAG
TCATTGTCGGGCCCCGTATGTTTAAGTTCGGCGAACGAGTCGCCATAGCTTCCATGCGTN
ATGGCCAAATGACCGAGAAATCTACATGGCTCAGCCATGCGTATGATGG
GenBank Accession AL938831 [GenBank]
Graphic View Graphic view of gene At1g76170
Predicted Position of Insertion Chr1:28585888 - go to primer design
BLAST e Value 6e-40
Hit Clone Code (BAC ID) T23E18
Hit Gene Code At1g76170 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation 2-thiocytidine tRNA biosynthesis protein, TtcA
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL938831 [GenBank]


Last Updated on 10.06.2021 13:37