SimpleSearch - Line and FST details


Line specific information

 
Line ID 240D03
Vector Used pAC161
Line Availability available as T3 set from NASC (N422983)
Segregation Analysis 50:25:19
Confirmed for Hit At5g51310
Parent of DUPLO pair none
Parent of pair(s) 12087

Gene hit At5g51310

 
Sequence (A. th genome BLAST matches underlined) 
>20-K014370-022-240-D03-8409
CTGATCCATGTAGATTTCCCGGACATGAAGCACTTTACACTTGAATATTCGGTACGAGGG
ACTCACTGGCTCTCTCGAAGATCACTCCCTTCATTACACGGACCCTCTCTGACCCTTTTT
AAATGGGAAACGACTTACTCCTTGCCTTGCTATCGGACCCGTCACCATATAACTGACGGC
GCTCACAACGAGTGCATTATCTTTACGGATGATATCCATCAGACCATCTCCCTCGATGGT
TCTGACTGAGATACCTCTCTAGGATTCTTGGTCAACGATCGTGATGCAACTCATGTNAGT
GTGCATTCCTATGGGATCCTCCCTTCCGGGAGA
GenBank Accession AL939024 [GenBank]
Graphic View Graphic view of gene At5g51310
Predicted Position of Insertion Chr5:20853032 - go to primer design
BLAST e Value 2e-15
Hit Clone Code (BAC ID) MWD22
Hit Gene Code At5g51310 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At2g38670

 
Sequence (A. th genome BLAST matches underlined) 
>20-K014366-022-240-D03-8409
CTGATCCATGTAGATTTCCCTGACATGAAAGCCTTTACAATTGAATATCAGGGAGAGAGA
AGTAATGTCATCCTCACTGATCAGCGACTTTATTTAAGGAACCCTCTTTGACCCTTTTTA
AAGGGAAAGACTTACTGCTTGCTTTTCTATGGGATCCTACCTATAGTGAGAGAGCACTGA
GGTAATGGAGTAAAATGACAGAAGAAAGGGATTCGTGAATCTATCAAGAAAAATAATCTT
GAGATACATCTATG
GenBank Accession AL939023 [GenBank]
Graphic View Graphic view of gene At2g38670
Predicted Position of Insertion Chr2:16170500 - go to primer design
BLAST e Value 4e-38
Hit Clone Code (BAC ID) T6A23
Hit Gene Code At2g38670 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation phosphorylethanolamine cytidylyltransferase 1
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37