SimpleSearch - Line and FST details


Line specific information

 
Line ID 240G11
Vector Used pAC161
Line Availability available as T3 set from NASC (N423027)
Segregation Analysis 50:41:39
Confirmed for Hit At2g34590
Parent of DUPLO pair none
Parent of pair(s) 7919

Gene hit At1g29100

 
Sequence (A. th genome BLAST matches underlined) 
>87-K014370-022-240-G11-8409
TTGATCCATGTAGATCTTCCCGGACATGAAGCACTTTACAATTGAATATATCCTGTGATC
TAGGGTCTATGATCTATATCATCGTCAGCTATCTGTATGTATGCATAAGTAGATAGCTCT
TCTGTAACTTTTTTTTTTTTGGGGGGGGGGCCACCCAACCCCCACAAAGAAATTTGGAAA
ATTTAAGTAAAAAAACCCCCCCAAAAAAAAAAAAAAAAAATCCCCAAAAAAAAAAGAAAG
GTTCCCCCCTTGGGAACCCCCC
GenBank Accession AL939060 [GenBank]
Graphic View Graphic view of gene At1g29100
Predicted Position of Insertion Chr1:10169748 - go to primer design
BLAST e Value 1e-19
Hit Clone Code (BAC ID) F28N24
Hit Gene Code At1g29100 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Heavy metal transport/detoxification superfamily protein
Insertion Classification TS2TE (3')
Confirmation Status unknown

Gene hit At2g34590

 
Sequence (A. th genome BLAST matches underlined) 
>87-K014366-022-240-G11-8409
GAACCCTGAGATCGCCAAACTTATCGCATGGATCCTCCTTAGGAGAAAAATCCCGCAAAA
AAAAAAAAAAATCCCAAAAAAAAAAAAGGTT
GenBank Accession BX285300 [GenBank]
Graphic View Graphic view of gene At2g34590
Predicted Position of Insertion Chr2:14569787 - go to primer design
BLAST e Value 1e-04
Hit Clone Code (BAC ID) T31E10
Hit Gene Code At2g34590 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Transketolase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37