SimpleSearch - Line and FST details


Line specific information

 
Line ID 241D12
Vector Used pAC161
Line Availability available as T3 set from NASC (N423088)
Segregation Analysis 50:3:2
Confirmed for Hit At4g17780
Parent of DUPLO pair none
Parent of pair(s) 68041, 96902, 96903

Gene hit At4g17780

 
Sequence (A. th genome BLAST matches underlined) 
>92-K014367-022-241-D12-8409
ACCTCCTTATAAGGTCTTTGAGGTAAGAAAATCGGAGTGTGCGAATGGATCGATCTACTG
GTTACACAAACCTACTGAGAGGGCTTGGACAATGCTATGGGATCCTCCCTATAGTGAGAN
NNNNNNNNNNNNNNNNNNCCNNTTTTNNNNNCCNNAAAANTGCNNANGNCCCCCCCCTTA
TTAAACCCCCCACACCTTTTTTTTCCTCTTTTTCTCTTTCTCTTCACCCCCCCCTTTTTT
TTTTTTCCTTTCCCCTTCCCCCCTTACCTCTCATCCCGGGGGGCCGCCGCCCCATACTCC
CCCCTCCTCTATTTTCTTCCCGCCATCTCTTCTACACTCGGTTTTTTGTATTCTACAAAA
AAAAAAATATTTTCTCTCCCCACCTTCTAATACAAATCTCAACATCTATAATCTCTCCCC
CTCCAACTATCTTCCCCCTCCCCGATTTTTTTCCCCCCCCCCCCCCCCCCGTCTTCCCGC
GTTCTACCTTCTATATTACCCCTTCCGCGCCTTTTCTTTTTTCCCCCACTACTTTTCACT
TTCCCCCAAAACTGGACATTTCCCCCCCCCCCCCCCTATACTCCCTCCGCTTTGTAATAT
ACCCCCCCCCCCCCATATATTATTATTTTTCTCACTTCTCCCGAATCCGAATTTTACCCC
CTTCCNCTCCTCATCTTGGTCTTCCCCTCCTCCATTTTATTCTACTCCCTCATCTGTTTC
CTCCCCCACGC
GenBank Accession AL939768 [GenBank]
Graphic View Graphic view of gene At4g17780
Predicted Position of Insertion Chr4:9880865 - go to primer design
BLAST e Value 3e-45
Hit Clone Code (BAC ID) FCAALL
Hit Gene Code At4g17780 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box and associated interaction domains-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL939769 [GenBank]


Last Updated on 10.06.2021 13:37