SimpleSearch - Line and FST details


Line specific information

 
Line ID 242E04
Vector Used pAC161
Line Availability available as T3 set from NASC (N423188)
Segregation Analysis 50:32:21
Confirmed for Hit At5g06170
Parent of DUPLO pair none
Parent of pair(s) 5128, 5135, 7466, 7469, 75760, 75761, 75762

Gene hit At5g06170

 
Sequence (A. th genome BLAST matches underlined) 
>29-K014388-022-242-E04-8409
TGATCCATGTAGATTTCCCGGAATGAAGCCATTTAAATTGACTCTAATTTAAAGAAAGAG
TGAATAAATCTTTGCAAAATAACTAATAAAAATAAAACAGCTATGGGATCCTCCCTATAG
TGAGACCGNTGCNTTCTTCCTTGTACGGTATCTGGATCCTTGACGTAGCTACAGCTCTCT
GAACGGACCTTGCCGGGCTTTTCTTGGTGATTTAGCAGCCGGAGATGCTAAGAAAACTCG
AACTGCCAACGTTATTTTCTCTTTCTTCATGGCCGTTGGAAACGTTTTGGGATAGGCTGC
GGGATCGTACACTACCCTCCACAAGATTTTCCCTTTCACAGTGACTAAAGCCTGCGACAT
CTATTGAGCAAATATCAAGAGCTGTTTCATTATTTGCATGACTCTCGTGATAGTCCTGAC
AATCATAGGTGTTTGGTGCGGGGAAGACGAGGGATGGTCGCCTAAT
GenBank Accession AL939874 [GenBank]
Graphic View Graphic view of gene At5g06170
Predicted Position of Insertion Chr5:1870141 - go to primer design
BLAST e Value 9e-113
Hit Clone Code (BAC ID) MBL20
Hit Gene Code At5g06170 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation sucrose-proton symporter 9
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL939875 [GenBank]


Last Updated on 10.06.2021 13:37