SimpleSearch - Line and FST details


Line specific information

 
Line ID 242H07
Vector Used pAC161
Line Availability available as T3 set from NASC (N423227)
Segregation Analysis 50:47:41
Confirmed for Hit At1g55840
Parent of DUPLO pair 2085
Parent of pair(s) none

Gene hit At1g55840

 
Sequence (A. th genome BLAST matches underlined) 
>56-K014388-022-242-H07-8409
CTGATCCATGTAGATTTCCCAGACATGAAGTCATTTACAATTGTTGTTTAAAAATATACA
GTGCTGTGGNATCCTCCATTAGTGACAGNGCAAAGGANAGCGCCATCACTGAAACCTATA
TACATGCCTTTCTAATTACCCCCGACACGATAAAAGGGGGTATTTTTTTCCCGGTTCTCC
CAGAAACCTATTTATAGAAAATCGCAAGTATCGATCTTTGGTTCAATAAGCCCAGACTTG
GACGCTGAATCTTTCTTTTCATCCTCCAAACAAGCGAATTTACTATCCCGATACGAGTGT
GTGAGTGAATCTCCGCCTGCCAATACCAAAAGGTAGTAAAATTAGTTTAAACCCTGCGAC
TCCCCCCAACGAAATTAAAACCCGGCGGGGTTAAAAGGGAAGACATTGGGCACCCACAGT
ACAGACCCCGATTTTTCCCTTAACCCCCGCAAATTCCTTCCCCGGCTTCTTCGATAGTGG
AGGGTTAATTCCCCAACCCTATGCGGGATCTCCATCCTCCGACCCCCCCTCCCGGCCCCC
GGCCAAGCTCTATCCTCCGCCCCTCTTCTCGTGCAGTGTGATCGCGGGTTGCTCTCCCTT
TCCCCCCCGCCCCCCATCCTTGACCCCCCCCCTGTGCTCGTGCCCCTCCCCCCCTTTGTT
TGTTCCCCACGTCTGCACCCCGGCCGCGTTTATTCTGCATTACCCCATGACTCGGCCCCG
CACACCATCCCTATGTCCTC
GenBank Accession AL939922 [GenBank]
Graphic View Graphic view of gene At1g55840
Predicted Position of Insertion Chr1:20874315 - go to primer design
BLAST e Value 4e-35
Hit Clone Code (BAC ID) F14J16
Hit Gene Code At1g55840 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Sec14p-like phosphatidylinositol transfer family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37