SimpleSearch - Line and FST details
Line specific information
| Line ID | 243B02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N423246) |
| Segregation Analysis | 100:27:24 |
| Confirmed for Hit | At2g19170 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3945, 3970 |
Gene hit At2g19170
| Sequence (A. th genome BLAST matches underlined) | >10-K014396-022-243-B02-8409 NATTGATCCATGTAGATTTCCCTGGACATGAAGCCTTTACCGGGAACCAAATTCGATCCA GTTCCTTCTGCCATTCCAGGAATCCTGATTACAGATGTGTCCAAGTCAATGGTAATGAGA GTTTTGATGCTTTCACTTACTCTTAGCCTATGGGATCCTCCCTATAGTGAG |
| GenBank Accession | BX890905 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:8315426 - go to primer design |
| BLAST e Value | 5e-56 |
| Hit Clone Code (BAC ID) | T20K24 |
| Hit Gene Code | At2g19170 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | subtilisin-like serine protease 3 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At1g53510
| Sequence (A. th genome BLAST matches underlined) | >10-K014389-022-243-B02-8409 CTGATCCATGTAGATTNTCCCGGACATGAAGCACTTTACACGGAAACTAATCTTATCTTC TAATTTGTGACGCCGCAGGAATGATAGTAACAGACCCGCCACAGTTTCGTATGGCCAGAA GAGATCCCATGACATATGTGCAACATTACTCTGAGTCCATGAGAGTAATAACATTATGAG ATGTTCTCAATTTAACAAGTCATGAGAAAGTGTACACATTTGATCTATTTAATATTTATT AACCAAAAAGGAAGCAAATCAATTATTTCGTTACGTGACGGTGGCATTAAGCATCTTGCA TTGAATGATCCGGGATATATAATCTCAGGTTTCCCCTGGGTTGAAATGATGATATTAAAT TTTAGGTTGACATGTACTTATCTTTGAAATAAAACAATTAAATATTTGAACTGACATGTC TACGTTATATCATAAATAAACCAGGGGGTTTAATTAAATACCACGATTAACCCTTCTAGA ATAAGGGAAAATGAATATTAATTCCGTCAATCACTATTATGTCGGGAAAACGATGCAATA ATATTTAGTTTTCTTTTCTTATAACACCATACTTTAATTAGATTATCAAAATACTCCTTC CTATTTTTATGTCGATGCGGAAAAGGTCCCCAAATCAAGCGCGACGAGCTAATGGACAAG ACCCCACCCTTTTCATGGCGGAAAACCCGACAACCCGCAAAAAAGACAAAAGAACTGCAN NTTTCATGGGCCGGGCGCGCTTCGGAGATCTCTCCAAATAGCACGGCGCCCGNCCCGTGG GACACCCAACCCGCCAACACAAGGGAGACACACCGCCGGAGCCCACCGGACGGGGGGGGC AGCAAACCTATGTGGACCA |
| GenBank Accession | AL939948 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:19970382 - go to primer design |
| BLAST e Value | 8e-135 |
| Hit Clone Code (BAC ID) | T3F20 |
| Hit Gene Code | At1g53510 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | mitogen-activated protein kinase 18 |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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