SimpleSearch - Line and FST details


Line specific information

 
Line ID 243D08
Vector Used pAC161
Line Availability available as T3 set from NASC (N423276)
Segregation Analysis 50:35:33
Confirmed for Hit At5g62210
Parent of DUPLO pair none
Parent of pair(s) 8026

Gene hit At5g62210

 
Sequence (A. th genome BLAST matches underlined) 
>60-K014396-022-243-D08-8409
TTGATCCATGTAGACTTTCCCGGACATGAANGCCTTTACAATTGATCCATATATTCTGAT
ATTTCGGGCAGTTGACTCCGGCAATGACTATGGGATCCTCCCTATAGGGAGGCTCCGTTT
TTATGAATAAGATACACATAACACATGCATCGTCACTAAAATCCATCAAAATAAGACTGT
TATATTCAAAATAAGTTTCATTAAGGTTCTAATGGCTTTGGTTTATCGGGAGTTTAACAA
ACTTCTTACCTGAATTCATATAACAAGATGGAATATGTATAACTTCAGGGTTTGAAATAG
TACGAACATAACAAATATCTGGACCCACAAATACAACAAAACAACCAACGAGTTTTTGTC
TATCAAACCCGGCTATCGCAGGCGTCCCCCACACCGTTCGTGACCCTCATTTCTATGGCA
CCCTTTCATAATTGAGGAACCCGCTAACCCACTCCCCACCCCTCACCCCAATCAACAAAA
TTTTCCCCTCCATCCCATCCCCCCCCCCCCCATACATATCCACTAAGCACCCGAACACTA
ATAACCCCCACCGTCCCGACCTACACCAAAACCCTATTCCACCCAACTAGATGTACCCCC
ACCACCCACACCAATTCCCCCCCCACTCCCCTTATTCTAATCCCATACTTTTAACTATCC
TCCCCCCATACACCCATACAATATTCCCAAACCCCTATCCAAGATCCTCCCCAAATCGCC
TTAGAGTCACACAGACACGCCCCCCAATATATCTTCGCCCTGTCCCGTCAAAAAACCGAT
AACCCCGCCGAACCCCGGAAAAGCTAATCCCCCCCAATCCCCTCTTCCCACAACCCACAC
ACAACCTTTAAACAAA
GenBank Accession AL939987 [GenBank]
Graphic View Graphic view of gene At5g62210
Predicted Position of Insertion Chr5:24986955 - go to primer design
BLAST e Value 6e-114
Hit Clone Code (BAC ID) MTG10
Hit Gene Code At5g62210 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Embryo-specific protein 3, (ATS3)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL939987 [GenBank]


Last Updated on 10.06.2021 13:37