SimpleSearch - Line and FST details


Line specific information

 
Line ID 243G06
Vector Used pAC161
Line Availability available as T3 set from NASC (N423310)
Segregation Analysis 50:27:27
Confirmed for Hit At3g58510
Parent of DUPLO pair none
Parent of pair(s) 2927, 9626

Gene hit At3g58510

 
Sequence (A. th genome BLAST matches underlined) 
>47-K014396-022-243-G06-8409
TTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAATATCAACTGTGTCT
GTTATGATGATCTTTAAAGAGAATATTTCACGTAATATCATCGAGGTTGTTTCTATAGTT
TGGTTTTAGCTTTAGTGTGCACAATATCCAAATTTCAACTTAACTCAATCAACGAACCTG
TTGTGTTCTATCGCCATGAATGGAGGTTGCTGGAAACTCATTCATGCACAGCCTATTTTC
CAAAGTATCAGCTCCCCTCTTTGTCTCCCAAAAACTAATGTCAATGATTGCTGTGTATAA
AAAGTGAAGATAGGCAGAATTAGTTAGAGCTTCAGTGATAATAAATCTTGGATAAGTGAA
CAGATGTAAATAATGCATTACCTTGTCTTGGGTCTCTCTTTGCCCTGAAGCACGCCCATT
ACAATGCTTCTCTTGTCCCACTCTTGACCCACCTCCACCTCTGGGCTAATAAAATTAGCG
GCTTGCACCCAATCCTTCCCACCGCCCAAAAATATTTAATTTG
GenBank Accession AL940029 [GenBank]
Graphic View Graphic view of gene At3g58510
Predicted Position of Insertion Chr3:21642903 - go to primer design
BLAST e Value 4e-161
Hit Clone Code (BAC ID) F14P22
Hit Gene Code At3g58510 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation DEA(D/H)-box RNA helicase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g08610

 
Sequence (A. th genome BLAST matches underlined) 
>47-K014389-022-243-G06-8409
CTGATCCATGTAGCATTTCCCGGACCATGAAGCCTTTACAATGGAATATATCCTGGATTG
CCTTCGAGGATGAGTTAAGAAAAACATTGCACGGTCAGTAGAATACAAATTCATGTGAGT
GCGCTTATATGAAAATGCTTACCCTTTTCACAGCCTCTGGGTCTATTGGCGGGAATGGAG
ACTTGGTGATGGGCAAGTCTTTAACAGATGACATAAAGTACTCTTCCCATGGTGCCAACA
ATAAGACTCCTTCCCCTTTCTTTCCTTTCCGACCGGTTCTGCCAAGTCTATGTATATACT
GGGCCCTGTCTGATGGCAATCCCATCTGCTAAAGCAAACAACTTCACTTGAACAAAAGAG
ATAAAATTTGAAGACGCAAAACAATGCCATGTCAGAAAACTATGGTTACCTGTACGACCA
CTGACACATCAAGGTAATTCACACCATGAGCAGATACATAAGATGTG
GenBank Accession AL940028 [GenBank]
Graphic View Graphic view of gene At5g08610
Predicted Position of Insertion Chr5:2793698 - go to primer design
BLAST e Value 7e-163
Hit Clone Code (BAC ID) MAH20
Hit Gene Code At5g08610 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation P-loop containing nucleoside triphosphate hydrolases superfamily protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37