SimpleSearch - Line and FST details


Line specific information

 
Line ID 244A10
Vector Used pAC161
Line Availability available as T3 set from NASC (N423338)
Segregation Analysis 50:37:11
Confirmed for Hit At3g25870
Parent of DUPLO pair 12136
Parent of pair(s) none

Gene hit At3g25870

 
Sequence (A. th genome BLAST matches underlined) 
>73-K014397-022-244-A10-8409
CTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGTCAAT
ATGGAGCCTCCATAGCTGAACCGGTGGTACGGGTTATCGCTTTGGTTAAGATGGTACGGT
TTTAATGAGTGGCAATACTGTAATTAAGCGTGAGATATGGGTACAGAATCGGAAGAAGGG
GAAACACGAGATTTTATAGTGGAGAGAAGATATAAAGAGAAGCAGATATAAAAGTCGGTA
ACGAAAGAGAAAGCGAGTGATTTCAGACGCAGACTTTGGCGCGTGTATAACGAATAGTTT
GGGCATCACAGATCTTTCACTTTTTTTTTTCCTATGGGATCCTCCCTTAAGGGGAGANNA
NAANNANNNNNNGGGAANAAAAAATTCTCCCCCTTTNTTTTTCGCGGGGCGCCCCCCCCC
TGCCGCCGGGCGNGNGAGAAGGCGAGCATTTACGACCGCTCCCCGCGGCGCCCCCACGGT
TCGCGAGCCCGACAACACCCGCCGCGGGGCCGGTTGCGCGAGAAAACACGGGCGCAGCCA
TGTCGACGGGCTGAAGGGCGCGGCCACCACGACCGCCGCACGGACCCCGCAACGCCCCCA
CCCCGCCCAATCAGTGCGCACGGCCGGACCAGGTGACGCCGCTAGCACCCCGACCCAATG
AACCCCCCGCCGGATATTGTTCGCCAGAGAACGGGGCGCCGGGCGAAGGAAGACGGACCG
CGGGCGGCACGCGCGACGCATTCGAAGCGCGCGCCCCGCCGTTACGTGCGCCGCCCAGCA
CACCGCCGCCAGCGGAGGATA
GenBank Accession AL940066 [GenBank]
Graphic View Graphic view of gene At3g25870
Predicted Position of Insertion Chr3:9464163 - go to primer design
BLAST e Value 2e-141
Hit Clone Code (BAC ID) MPE11
Hit Gene Code At3g25870 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL940065 [GenBank]


Last Updated on 10.06.2021 13:37