SimpleSearch - Line and FST details
Line specific information
Line ID | 244E08 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N423384) |
Segregation Analysis | 50:6:5 |
Confirmed for Hit | At4g23390 |
Parent of DUPLO pair | none |
Parent of pair(s) | 67611, 96699, 96700 |
Gene hit At4g23390
Sequence (A. th genome BLAST matches underlined) | >61-K014390-022-244-E08-8409 ATGTAGGTTTGTAGGATAAACCTTAATAGATGGTTCTTGAGCAAAGATGATATAAGCTAT GGGATCCTCCCTAAGTGAGACNCNCCNCCCTCCCTNTCCCTTCTTCTTTGTATTAAAAAT GTTAGGCACCTCCCTCATACCAACATACACCACCCTCTCCCTTACTATTGTTTTATTTCT AACCGTCCCCCGCCATTTTATCTCCCCCCCTCCACATTTTTTTTATCGCCCCCGCCTTTT TTTTTACACCCCCCCCCCCTTTTCTTTTCATTTCGGGCCCCTCCGCCCAATTTTTCCCCT CCAATCCGTTCCGCCGCCATACATTTCCCCCCCCCCCCTTTTGTCGGACACGAAACGGGC CCCCCGCCCCCATATTCCTTTCTGCTTTTTTCCCCCCGGCCCCCGCGTTTAATCGCCCGC GCCGATCAATTCCCCGCTTTCATATCGACCTTGGTTATTCTTCAGTTATTCTCTCCCCCG CCTCCAGAATTTCCCCCGCCTCGTTCCCCTGTTCCCGCGGCACCGTCGGACTAAACCGCG TTTCGCCGCGCCGAATACCCCCGTCAACATCCCAACCCGCGGCCGTTTCTTCTTTCCTAT CCTCCCATTCCATGCCCATTATTTCCCCCCATCTGTCTCTTTCTCCTCGCCGCGATGACG TTCGTCTTTCCTTTCTTTCGCCCTTCGCTTTTTACCCCATTCCCCCGCCCCCATTACGCA TCCTGTCCCCGTGGGCCGGGTCGTCGCGCAAATTTCAGACTCACGTGGAAGAATCCGCCG TACATCGCGTGTTGCACCCCTTGGACCGTTCGAGGCATTGCTTTCTCTCCTGCTCATCGC TCCCCTCGCATAATTATCATTAGTCGCGTGCGTCCCACTCAGCCCTCTCTAATTTTTTTC TCTTT |
GenBank Accession | AL940109 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr4:12219288 - go to primer design |
BLAST e Value | 4e-10 |
Hit Clone Code (BAC ID) | F16G20 |
Hit Gene Code | At4g23390 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | NEP-interacting protein, putative (DUF239) |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Other FSTs Supporting this Hit | AL940109 [GenBank] |
Last Updated on 10.06.2021 13:37 |