SimpleSearch - Line and FST details


Line specific information

 
Line ID 245A10
Vector Used pAC161
Line Availability available as T3 set from NASC (N423434)
Segregation Analysis 50:17:7
Confirmed for Hit At1g31460
Parent of DUPLO pair 12407
Parent of pair(s) none
Note

Gene hit At4g08350

 
Sequence (A. th genome BLAST matches underlined) 
>73-K014398-022-245-A10-8409
TTTGATCCATGTAGACTTTCCTGGACTGAAGACACTTTTCAACGAATCTCTCATATCGTT
TCTTTATCTGTAATTGTGTTTTTATTATACCCTATGGGATCCTCCCTATAGTGAGATTGA
CTCCCGATCAACTGTATATATGAACTATTGTTATAATACGATCGACGTGTCTAAACCCAC
ACGCAGATAACAGAATTCAAGGGCCTGCCTGTCACAATCTTCATCTCAAGTAAACACGCA
CTGTGATATCCTTTCACTTATATTACAGGCCCCCTAT
GenBank Accession FR806415 [GenBank]
Graphic View Graphic view of gene At4g08350
Predicted Position of Insertion Chr4:5290325 - go to primer design
BLAST e Value 5e-28
Hit Clone Code (BAC ID) T28D5
Hit Gene Code At4g08350 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation global transcription factor group A2
Insertion Classification CDSi
Confirmation Status failed

Gene hit At1g31460

 
Sequence (A. th genome BLAST matches underlined) 
>73-K014391-022-245-A10-8409
TTTGATCCATGTAGAGTTTCCCGGAGCATGAAGACCTGTTGCTTCGAAAATAAGCTGCCG
TATATCTGAGAGCACGAGATCTGAATATGCGCATCGGAGGTTCTCGACGACTTGCTTAGA
GATCAGACACGCTCCTCCTATTGCTAGACATGCTCTTCCACTGGTGACCTCTGCCGTATG
TAAACGATACCCGAGCTGACGTCGTCATCTGTGATATCACCACTGCTGATGGGGGACTTG
TCTACTTTTTGGGGTACACGAAAGATATATGAGCTAGACAGAATGAGCATGATGAATGCC
GCCTCAACGGCTAATTCATGATTTTGTCAGTTACGTTGGCTCCGATTCTGTGCGCGTCAA
TTTTGATGACTAACCCACAAAATGTGTGATTAAGCTTTAATCTAATTACTTTATTAAAGA
CAATTTTAATTTAAGATTCTATTCATATAATATGTAAGCAAAAACTGGTGTCTTTCTCTC
AATAAGTTCCACTAATTATCTTTTCTGTGGTTTCTATGTGTTACAGATGTGATTTACAAT
GGATCAAGATCCTTGTACGATGATGTTAATGAAACCTTGTCTTGTTCAAGCCGGTGATAA
ACCGGGATGGGTTCGTATGGTCAGTGACAGACTTGAGACGACGCCCGAGATATACAAGCA
ACCCCCAAACACAAACGTTTTGGAAGTGGCCATCTCTTCCGGAGCAAACCATTGAGTCAG
ACCCTATTGGTG
GenBank Accession AL940171 [GenBank]
Graphic View Graphic view of gene At1g31460
Predicted Position of Insertion Chr1:11262462 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T8E3
Hit Gene Code At1g31460 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation vitellogenin-2 protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37