SimpleSearch - Line and FST details


Line specific information

 
Line ID 245E05
Vector Used pAC161
Line Availability available as T3 set from NASC (N423477)
Segregation Analysis 50:47:36
Confirmed for Hit At1g03370
Parent of DUPLO pair 30
Parent of pair(s) none

Gene hit At1g03370

 
Sequence (A. th genome BLAST matches underlined) 
>37-K014391-022-245-E05-8409
NTGATCCATGGTAGATTTCCCGGACATGAAGGCCTTTAGCAGGTGCATACTATACCTGCA
TCATGCTTGTAGCTGCATCTCTCGTGAACCTGACCTGCCATTTGGCGAGCAGTGTTACAA
GTTGTGGTACTCTCTATGGACATTGAACTGTCTTCATAGCACCATGATCAGACGTGTGAG
TAAATAACGGAACTCTACACAGTCTAAAAGACATCTTCTGCAGTATGCGCAATCTGTTGG
CTCATACGGGAAAGCCTGCAGATTCTAAGGATATTGGGCTGAACAAGGATCCAGCTCTAT
CTTCCTTGCGAGCTGAGCCTAAGTCAAACTGGTAATTGGCTGTACAGCATTTACCCAATT
TGACCGAGTTATCCACTTTCTTGATTGTTATTTATGTATTTGTCCACATTGTGTTTGCCA
TACCCAGTGCAATCCAAAGGCTTGAGTTTAATGGCCTTGATTTACCGGATTCAATTGGGG
AGTTTGTTGTTAGTGGGGTTCTCGGTCCTCAATGTGAAAGAGTCCTGCAACTGATCTCCC
GTTTCATGGCGGCAAGGAAACAGAAAGGGGACATCCATGAAGATACAGCATCGACCATTG
TATATTCTTTTTTGGGGGCTCCCATTGGTAACCGGGCGGGGGGTATGCCGATGGACCATA
CCCTGGCCCCACCAATTATTCGCCGGGGACTACCGCGTCCAAAGCGCAGGGAAAAAGTTA
CCCCCACTCACCGCGGCTCGTAGGAGAAAGGGGGGCAGAAAGGGGAGGCTACGCGGGGGG
GGGGGGCCGGAAAGCGGGAGCAATAGAAGCCATGTTCCTCCCGCCGGGGGGCCGGGGGGC
CAGGGGCGGGGCGCGGGGGCGCCGGAGAAAGGGCAAAAAGAATA
GenBank Accession AL940223 [GenBank]
Graphic View Graphic view of gene At1g03370
Predicted Position of Insertion Chr1:832136 - go to primer design
BLAST e Value 1e-142
Hit Clone Code (BAC ID) F15K9
Hit Gene Code At1g03370 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation C2 calcium/lipid-binding and GRAM domain containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR806423 [GenBank]


Last Updated on 10.06.2021 13:37