SimpleSearch - Line and FST details


Line specific information

 
Line ID 248A05
Vector Used pAC161
Line Availability available as T3 set from NASC (N423717)
Segregation Analysis 50:6:4
Confirmed for Hit At2g31750
Parent of DUPLO pair none
Parent of pair(s) 4575, 9964, 9995, 72766, 72771, 72772

Gene hit At2g31750

 
Sequence (A. th genome BLAST matches underlined) 
>33-K014443-022-248-A05-8409
NTTTTGATCGCATGTAGATTTCCCGGTACATGAAGCCTTTACAATTGAATATTGACACGT
CTCACTCATTGCTTCTGTTGTTGATATTGCACCATATGTGCATCCTACCTATAATGAGAT
CCCGAATATCTTATGCAATTGGTTGGGGTCTTAATTAAACGTGGCAAATATGTAGCCAGA
AAACGAATATCGTCTCAAATATACATACGTGTCACGCCGTTTACCTTTCCATTGAAAGCA
TACATACTGGCTATGGGATCCTGCCTTAAATGAGATNTTACNAAGATCTTTTGATGTATC
AAAATCGGGATAGATTATAATTGGTGCTACAAACAAGGAAACACTGTGCAAGCTAATTCT
AAAGCTA
GenBank Accession AL940440 [GenBank]
Graphic View Graphic view of gene At2g31750
Predicted Position of Insertion Chr2:13498257 - go to primer design
BLAST e Value 8e-64
Hit Clone Code (BAC ID) F20M17
Hit Gene Code At2g31750 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation UDP-glucosyl transferase 74D1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At3g08840

 
Sequence (A. th genome BLAST matches underlined) 
>33-K014448-022-248-A05-8409
CCGGCTATATTATGCTATTGGTTGGGAGATTACATAATCGCGGCGCATGTGTGACCAGAA
AACGAATGTCCACTGAAATGTACATACGGAGGACGCCGATTACCTTATCATTGAAAGCAT
ACATACTCACTAGGGGATCCTCCCTATAATGAGATTCTCCACATAATATATGTCCACGGC
ATTGTTTAATCTTCCTTTCCTGTTCTTAAATAAAGGTCCAGGC
GenBank Accession FR806470 [GenBank]
Graphic View Graphic view of gene At3g08840
Predicted Position of Insertion Chr3:2681781 - go to primer design
BLAST e Value 5e-22
Hit Clone Code (BAC ID) T16O11
Hit Gene Code At3g08840 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation D-alanine-D-alanine ligase family
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37