SimpleSearch - Line and FST details


Line specific information

 
Line ID 249B08
Vector Used pAC161
Line Availability available as T3 set from NASC (N423828)
Segregation Analysis 50:8:4
Confirmed for Hit At2g39300
Parent of DUPLO pair 12223
Parent of pair(s) none

Gene hit At2g39300

 
Sequence (A. th genome BLAST matches underlined) 
>58-K014444-022-249-B08-8409
TCTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAAGGAGTTACAGTCGGGTAG
ACACATGCCTGTAGAGCAGTGTGTACTAGTACCCTGCAATGGAACAACGTCAGGTTGGGG
GGAGTCCAATCGTCACTGAGAAAGGACGTGCACATCCATGAAGCTCCAATCTGAATCTCT
TCGTCGTGAGAATAACTGTCTGCTGAGTCCTGTCACCCGAACTGGAGAAGACCCTGACAT
TGTGACGACCTTCAAGCTATGGCATTCTCTCTTAAGTGAGGGCTATGGGATCCTCCCATN
AGGGAGTATCATATCCATACGCTCCCCCTCCTTTTCATGAAAGGTCGATATTTCTCTCTG
GAGTGAGACATTATGCTCAGCAAGCTCTATGACACGTTCCCTCAGCCTTTTCTCCTCCAC
CTTGAAACTCTCGACCTTCGAAGTCCACTCACTTGACCTTCTATCAGGCTCTGGCTCTAC
CTGAACTTGGACCTCACCCTTCTCTTTTTCTATGGGATC
GenBank Accession AL940548 [GenBank]
Graphic View Graphic view of gene At2g39300
Predicted Position of Insertion Chr2:16411317 - go to primer design
BLAST e Value 1e-81
Hit Clone Code (BAC ID) T16B24
Hit Gene Code At2g39300 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation CAP-gly domain linker
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37