SimpleSearch - Line and FST details


Line specific information

 
Line ID 250A05
Vector Used pAC161
Line Availability available as T3 set from NASC (N423909)
Segregation Analysis 100:44:40
Confirmed for Hit At2g13800
Parent of DUPLO pair none
Parent of pair(s) 6118, 6199, 6202, 6257, 86063, 86066, 86075, 86076, 86077, 86078, 86079, 86080, 86081, 86084, 86089, 86094, 86098, 86102, 86103, 86104, 86106, 86107

Gene hit At2g13800

 
Sequence (A. th genome BLAST matches underlined) 
>33-K014486-022-250-A05-8409
TTGATCCATGTAGCATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGAAAGT
ATTATCTTGTTTATCCCTAATGGCTAATGGAAGTGTTGCTTCTTGTTTAACAGGTATCAC
ATTCTTTGTCCTAAAGGCTATTTGTATATATTTTTGTTTTGTTTTGACTGGTTTGTGATT
GGTCAGTTGGTAAGTATCTTATCTTTGATTTTCTATTATAGAGCGTCCTGAAGGCAATCC
AGCCCTTGACTGGCCAAAAAGAAAGCATATTGCTCTGGGATCAGCAAGGGGGCTCGCATA
TTTACACGATCATTGCGACCAAAAGATCATTCACCTGGATGTGAAAGCTGCAAATATACT
GTTAGATGAAGAGTTTGAAGCTGTTGTTGGACATTTTGGGCTATGGGATCCTC
GenBank Accession AL940626 [GenBank]
Graphic View Graphic view of gene At2g13800
Predicted Position of Insertion Chr2:5756092 - go to primer design
BLAST e Value 1e-173
Hit Clone Code (BAC ID) F13J11
Hit Gene Code At2g13800 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation somatic embryogenesis receptor-like kinase 5
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL940627 [GenBank]


Last Updated on 10.06.2021 13:37