SimpleSearch - Line and FST details


Line specific information

 
Line ID 250D01
Vector Used pAC161
Line Availability available as T3 set from NASC (N423941)
Segregation Analysis 50:42:38
Confirmed for Hit At4g16090
Parent of DUPLO pair 12202
Parent of pair(s) none

Gene hit At4g16090

 
Sequence (A. th genome BLAST matches underlined) 
>04-K014486-022-250-D01-8409
NTGATCCATGTAGAATTTCCCGGACCATGAAGCCTTTACAATTTACAAAGTATTACCGAC
TGGCTTTGCAGTAAGGGGTGGCCGGACTTAATGTCCCATCGGACGGGGAGTTACCATGAG
TCACTGTTGCATTATAAAGATATTAAAGCGCTATATGTTACTGACTACCACAATTCAAGT
AGCTCCAAAACTGACAAAACCATTTCTTTATATCCCCTTGTTAACCTTATATCTATCCAT
CAACAAGCTATCACTAACGCCGAAATGACTTGTACACCTGATCAAACTAAATATTTTGCA
GGATGTGTCAATCGCTTAAGACCTATCAACAATTGCGATACGCCTGGTATCACACACAAA
GACTCTGGGACCCTCATCTTTAAGACCCCTTTTACATATTATTGATCAATCAAAGGTTAT
GTATTCAAAGAGAGATGAAAAGTTCTACACTGCTATAGGATCCTCCCTTGGGGGGAGGAT
CCATCGAAATGAAACACAAGGGGGGGTAGCCAAAGGGATGAAATTATGGGACCCCCCACC
GCATATGCCTAAACTGAAAATCCAAAAAAACCGGCTAACCAAATCCCAAAT
GenBank Accession AL940666 [GenBank]
Graphic View Graphic view of gene At4g16090
Predicted Position of Insertion Chr4:9103379 - go to primer design
BLAST e Value 5e-59
Hit Clone Code (BAC ID) FCAALL
Hit Gene Code At4g16090 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL940666 [GenBank]


Last Updated on 10.06.2021 13:37