SimpleSearch - Line and FST details


Line specific information

 
Line ID 250D10
Vector Used pAC161
Line Availability available as T3 set from NASC (N423950)
Segregation Analysis 50:44:36
Confirmed for Hit At1g29080
Parent of DUPLO pair none
Parent of pair(s) 4497, 4576, 4618, 10011, 10910

Gene hit At1g29080

 
Sequence (A. th genome BLAST matches underlined) 
>76-K014490-022-250-D10-8409
TGATCCATGTTGATTATCCCGGACATGAAGCACTTTACATTTGAAATATCCGGACGAATA
ACATGCCTCGGGGTGCAATATAGCTGCCGGAAGCGTTACAAATGTGCCCTCCCTTGCACC
ATTGTACTGCTCTCTGGTGCAATCTAACTTATGGACGATGAAGGATACTCACTCTATACC
CTGAGCCTCTGGTATACTCGTCTGACAATCCTATTCTCGGTACGGTAACTACCGAGGTCG
CGGCTCATTCTCTACAGGAGGAAGAGGGTTGCATCAACGCTATCAAGCCCTAACTATCGG
ATCCTTCCTATAGAGAGAGGTTGTGGATGGACGTACCTCCCCTCCTTACTGGCCTCCACC
CGACACCGACCTGCCCTGCCTCCGCCGCGATACGTGGCGTCCCCTTCCCGGACATTGAAC
CCTATAAGGCGTAGCGATAAACCCCCGGCGCCGCCGGAAGCATTGACCTCCCCCTATTTT
CCCCCCCCGATCCCCCTTTGCCCCCTCTTCTTCGCCGACCCCCTCCGCGTTTCCCCCTCC
CCGCTTGCACACCGCACCATACTACCCTCCTTACCGCCCAACCACTTTCGATCCGCGCCC
CCCCATATCCCAATTAATTTCCGCACGCATATACCGCCCCCCCACCCCCGTTTCCCCCCC
CGATTTTTGGTTCTCCCCCCCTCGTTCCCTCCCTTCTCCCCACCCCCCCCCCCCCCCC
GenBank Accession FR806497 [GenBank]
Graphic View Graphic view of gene At1g29080
Predicted Position of Insertion Chr1:10157899 - go to primer design
BLAST e Value 2e-06
Hit Clone Code (BAC ID) F28N24
Hit Gene Code At1g29080 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Papain family cysteine protease
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR806497 [GenBank]


Last Updated on 10.06.2021 13:37