SimpleSearch - Line and FST details


Line specific information

 
Line ID 251D07
Vector Used pAC161
Line Availability available as T3 set from NASC (N424043)
Segregation Analysis 25:17:13
Confirmed for Hit At5g57710
Parent of DUPLO pair none
Parent of pair(s) none
Note

Gene hit At1g67260

 
Sequence (A. th genome BLAST matches underlined) 
>52-K014552-022-251-D07-8409
CTGATCCATGTAGAATTTCCCGGACATGAAGCACTTTACAATTGAATATATACATGTAAA
CTCCTCTTATCTATTGGGGCGCATAATGACGCGATACAATGAGTATACTGAGCCTCATCT
ACTTTTGGCGATCGACGCAGCGGATGTGCACATCCCTGGACAGGCGGAACGCTCAGTAAA
CTATAATATCCGATTTGGTGTATCGAGATTGGTTATGAAATACCGATGCTATGGGATCCT
CCCATTAGTGAGATCCAAACTTTACCTTTGGGGAAATTTTTGTCGGTGACTACATATAAG
GTTTGGTCATGAAAAGGGTTTTGATCATAACTATAATCCAAATTTTGAGGCAGAAATGTA
TTATAGTTGCTGCTATGGGATCCTCCCTTAGGTGA
GenBank Accession AL940757 [GenBank]
Graphic View Graphic view of gene At1g67260
Predicted Position of Insertion Chr1:25168056 - go to primer design
BLAST e Value 3e-63
Hit Clone Code (BAC ID) F1N21
Hit Gene Code At1g67260 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation TCP family transcription factor
Insertion Classification 3' region
Confirmation Status failed

Gene hit At5g57710

 
Sequence (A. th genome BLAST matches underlined) 
>52-K014555-022-251-D07-8409
CTGATCCACTGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCATGTGGA
CACATTATAACACGTTAGGGGTAAAAATAGTAAAAAAAAACGCGTTTATAGTCCTTTACT
TCTTTTTGTTTTACTCCCACCCTATGGGATCCTCCCTATAGTGAGACCTATGGGATCCTC
CCTATAGTGAG
GenBank Accession AL940758 [GenBank]
Graphic View Graphic view of gene At5g57710
Predicted Position of Insertion Chr5:23388142 - go to primer design
BLAST e Value 1e-07
Hit Clone Code (BAC ID) MRI1
Hit Gene Code At5g57710 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
Insertion Classification TS2TE (3')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37