SimpleSearch - Line and FST details
Line specific information
| Line ID | 252E04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N424148) |
| Segregation Analysis | 50:21:20 |
| Confirmed for Hit | At3g63260 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 97758, 97760, 97762, 97763 |
Gene hit At3g63260
| Sequence (A. th genome BLAST matches underlined) | >29-K014573-022-252-E04-8409 TTGATCCATGGTAGATTTCCCGGACATGAAGACGTCTACATATGAAGTATATTGGTTGAT GAGGAACTTCTTAAGCGTGCCTCCGGTGACATAGTTCAAGCCCAACACAGCCTGCCCTCG CATGATGTGCACCAGTTACCACTTCCGCCAGTATCACCAGCAGGAGGGATCCGCAAATCA GAGGTTCCCATGGATGCTCCTATAAACTGCCACAGAGAGAGAGAGGTCAAATGAGTAAGT CCTTTGATCAAAAGGTTCTTCTTCTACCTTAATCGGTGAATGAAAAAAGAATACCTTGGT AACGTTGGGATGATCGAGCTTCTGCCAGACGGCGACCTCTTGCTCGAAGGAAGCACGGAG AGCTGTAGTTTCAGCTGGTGTGGCGTAACCATCTTCTCCCCAATCTAACACTTTCACTGC AGCAAACCATAACATCCATCAGACGGGAGATCCCGCAAAAAGACCACCAGTGTCTATCCT AATGAATCATATATATCTTAGGCCTATGGGATCCTC |
| GenBank Accession | AL940852 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:23373960 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F16M2 |
| Hit Gene Code | At3g63260 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Protein kinase superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At1g68875
| Sequence (A. th genome BLAST matches underlined) | >29-K014577-022-252-E04-8409 NTGATCCATGTAGATTNTCCCGGACATGAAGACCTTTACAATTGAATATATTCTTTGATG ATGAACTCCTTATACGTGCCTCCGGTGTGATATTCATGCACATCTCTGCCCGCCCTCCAA CGATGTGCACAGTTACACACATCCGCCAGGATCATCCCCTAGAGGGATCTACTAACTCCA GATTCTCCTGTGCGCTCATCTGAACTGCCAAAGAGAGACATAGGACCAAAGAGACTTTCC TTAGACCATAAGGTGGTTTATGTTACCTTGCTCCGTGAACTGATAAACATAACCTTGGTG GCGTTGAGAAGAAAATACTTATGCTTAGAGCGACGTCTTGCTCGCAATGAATCGCGGATA AACTAGTAGAAGGCTTGGAGAGAGCGCAACCATATTTTCCCGAGAAACCGCTGTCACGGT TGCGAACCTTAACATGAATCAGACCGGAAATAGCTGGGCAATGCCACGAGCGTCTATCCT AGAGAATAATGTGTATCGGAACCGATGGGATCGATCTGTNGGGGGAGGAAAGAATTNCAT TATCATGACACCACATATTGATCCCGTGCGGGTCGGGAAAAACCCGAAAACCGGGGGGAT TCCTCAAAAAAGGCGCCTATTTCCAGATAACCCCATCATTTATT |
| GenBank Accession | FR806538 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:25892396 - go to primer design |
| BLAST e Value | 2e-21 |
| Hit Clone Code (BAC ID) | T6L1 |
| Hit Gene Code | At1g68875 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | hypothetical protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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