SimpleSearch - Line and FST details


Line specific information

 
Line ID 253C09
Vector Used pAC161
Line Availability available as T3 set from NASC (N424225)
Segregation Analysis 100:75:53
Confirmed for Hit At5g60780
Parent of DUPLO pair none
Parent of pair(s) 93061, 93066, 93073, 93075, 93077

Gene hit At5g60780

 
Sequence (A. th genome BLAST matches underlined) 
>67-K014574-022-253-C09-8409
NTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAATCTGAGTATGAGGG
ACTCAGCTGTACTAAACCTCGCTGATGAGACGAAAAGCAGTTGAGTCAAACCGGACCCGA
AGTTTCCTCCTGCGCCGGTTAGTCCCGATATGAGCCCTATAGAACGGTGCGAGACAAAAG
GTGCAACTCCGAAGAGGGCTCCGCAAGCTGCTTGTGTACCGATTGAGAAGAGCATCATTG
CTATGGGATCCTCCCTTAGGTGAGGAGGTCACTTCTCTGTGGATGCCGACGGTTATATGA
ACTGCTATGGGATCCTCCCTATTATGAGANTGATGGNATTTGNAGGAGCCACCTTCCTTT
TCCACTATCTTCACAATAAAGCGACAGATACCTGGGCAATGGAATCCGAGGAGGTTTCCG
GATATTACCCTTGGTGGAAAAGTGTCAGTCGCCCTCTCGACTTCTGAGAC
GenBank Accession CR356293 [GenBank]
Graphic View Graphic view of gene At5g60780
Predicted Position of Insertion Chr5:24452480 - go to primer design
BLAST e Value 7e-89
Hit Clone Code (BAC ID) MAE1
Hit Gene Code At5g60780 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation nitrate transporter 2.3
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37