SimpleSearch - Line and FST details
Line specific information
Line ID | 255G10 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N424466) |
Segregation Analysis | 98:84:67 |
Confirmed for Hit | At3g18180 At3g16340 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At3g18180
Sequence (A. th genome BLAST matches underlined) | >79-K014580-022-255-G10-8409 GATTTACACTGNATTCTTACGTCGCCGCTTACATCGCAAACTCTTTGCTTCCTAGGAATC CTCCTATAGTGAGAGNGNNANAANCNNCNNNNCCCCCTTTTTTTCTTTCCGATATGATAG GTCCCGAGCGATAAAAAGCACCCCCGTCCCACCGACCACACACTCCCCCCCACATCTTCC CCCCCCCCCACTTTCCCGATTCCACCCTTTCCCCCCCCCCCCCTTCCAACATAGATAACC ACTTCTGTCATTCTGCCAACCCAACCAAAATCACACCCACCATATTCCACCCCCCCCCTT GTATGCCCCCACACCCCGGCGCACACAGGTGGCCAACCGCAACGGCGCTCGACCCCACCC AAACGCCAGCAGCCGCTCACACCAATGCGCCGTCCGGCCCCAAACTCAGTTCACCACAAA ATTAACCACCACGATCCCCACCCGAAGCGTGAGCTACCCACTCACCCATAGTCTTTTACG GGACCCCCGCGAAGAACCCGAGAAAGTCTACCCGGACAGCCGGAACCGCCCCTTTATAAA TTACCCCGTATACCCTGCCACGACGGTTATCGGGCCGGACGTACGTACCATCCCGTTTCC CCCCACCCCCATTTTTTTTCTCGTTACCCCCGCCGCCGCCTCCTCTTAATAATATCTCCG CCCCCCCCGCGGTGCCTGTTTATCTCCCATCGCGCCCGACACAAAACAAAGTTTATTCTT TTGT |
GenBank Accession | AL941230 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr3:6230815 - go to primer design |
BLAST e Value | 7e-12 |
Hit Clone Code (BAC ID) | MRC8 |
Hit Gene Code | At3g18180 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | Glycosyltransferase family 61 protein |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Gene hit At3g16340
Sequence (A. th genome BLAST matches underlined) | >79-K014576-022-255-G10-8409 GATTTCCTGACATGAAGCACTTTACAATTGGTAAAGAAGAGAAGGGTTTGTTTATTTATG CATTTTGATTTGGTAGCCGTTTAAAAAATTTCGGAAAATAAAAAGAAAGCGTGAGGAATA TGCGGGCTGAGTGGGTAAGAGCTATGGGATCCTCC |
GenBank Accession | AL941229 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr3:5539872 - go to primer design |
BLAST e Value | 8e-24 |
Hit Clone Code (BAC ID) | MYA6 |
Hit Gene Code | At3g16340 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | pleiotropic drug resistance 1 |
Insertion Classification | TS2TE (5') |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Last Updated on 10.06.2021 13:37 |