SimpleSearch - Line and FST details


Line specific information

 
Line ID 255G10
Vector Used pAC161
Line Availability available as T3 set from NASC (N424466)
Segregation Analysis 98:84:67
Confirmed for Hit At3g18180 At3g16340
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At3g18180

 
Sequence (A. th genome BLAST matches underlined)
>79-K014580-022-255-G10-8409
GATTTACACTGNATTCTTACGTCGCCGCTTACATCGCAAACTCTTTGCTTCCTAGGAATC
CTCCTATAGTGAGAGNGNNANAANCNNCNNNNCCCCCTTTTTTTCTTTCCGATATGATAG
GTCCCGAGCGATAAAAAGCACCCCCGTCCCACCGACCACACACTCCCCCCCACATCTTCC
CCCCCCCCCACTTTCCCGATTCCACCCTTTCCCCCCCCCCCCCTTCCAACATAGATAACC
ACTTCTGTCATTCTGCCAACCCAACCAAAATCACACCCACCATATTCCACCCCCCCCCTT
GTATGCCCCCACACCCCGGCGCACACAGGTGGCCAACCGCAACGGCGCTCGACCCCACCC
AAACGCCAGCAGCCGCTCACACCAATGCGCCGTCCGGCCCCAAACTCAGTTCACCACAAA
ATTAACCACCACGATCCCCACCCGAAGCGTGAGCTACCCACTCACCCATAGTCTTTTACG
GGACCCCCGCGAAGAACCCGAGAAAGTCTACCCGGACAGCCGGAACCGCCCCTTTATAAA
TTACCCCGTATACCCTGCCACGACGGTTATCGGGCCGGACGTACGTACCATCCCGTTTCC
CCCCACCCCCATTTTTTTTCTCGTTACCCCCGCCGCCGCCTCCTCTTAATAATATCTCCG
CCCCCCCCGCGGTGCCTGTTTATCTCCCATCGCGCCCGACACAAAACAAAGTTTATTCTT
TTGT
GenBank Accession AL941230 [GenBank]
Graphic View Graphic view of gene At3g18180
Predicted Position of Insertion Chr3:6230815 - go to primer design
BLAST e Value 7e-12
Hit Clone Code (BAC ID) MRC8
Hit Gene Code At3g18180 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Glycosyltransferase family 61 protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At3g16340

 
Sequence (A. th genome BLAST matches underlined)
>79-K014576-022-255-G10-8409
GATTTCCTGACATGAAGCACTTTACAATTGGTAAAGAAGAGAAGGGTTTGTTTATTTATG
CATTTTGATTTGGTAGCCGTTTAAAAAATTTCGGAAAATAAAAAGAAAGCGTGAGGAATA
TGCGGGCTGAGTGGGTAAGAGCTATGGGATCCTCC
GenBank Accession AL941229 [GenBank]
Graphic View Graphic view of gene At3g16340
Predicted Position of Insertion Chr3:5539872 - go to primer design
BLAST e Value 8e-24
Hit Clone Code (BAC ID) MYA6
Hit Gene Code At3g16340 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation pleiotropic drug resistance 1
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37