SimpleSearch - Line and FST details
Line specific information
| Line ID | 255G10 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N424466) |
| Segregation Analysis | 98:84:67 |
| Confirmed for Hit | At3g18180 At3g16340 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At3g18180
| Sequence (A. th genome BLAST matches underlined) | >79-K014580-022-255-G10-8409 GATTTACACTGNATTCTTACGTCGCCGCTTACATCGCAAACTCTTTGCTTCCTAGGAATC CTCCTATAGTGAGAGNGNNANAANCNNCNNNNCCCCCTTTTTTTCTTTCCGATATGATAG GTCCCGAGCGATAAAAAGCACCCCCGTCCCACCGACCACACACTCCCCCCCACATCTTCC CCCCCCCCCACTTTCCCGATTCCACCCTTTCCCCCCCCCCCCCTTCCAACATAGATAACC ACTTCTGTCATTCTGCCAACCCAACCAAAATCACACCCACCATATTCCACCCCCCCCCTT GTATGCCCCCACACCCCGGCGCACACAGGTGGCCAACCGCAACGGCGCTCGACCCCACCC AAACGCCAGCAGCCGCTCACACCAATGCGCCGTCCGGCCCCAAACTCAGTTCACCACAAA ATTAACCACCACGATCCCCACCCGAAGCGTGAGCTACCCACTCACCCATAGTCTTTTACG GGACCCCCGCGAAGAACCCGAGAAAGTCTACCCGGACAGCCGGAACCGCCCCTTTATAAA TTACCCCGTATACCCTGCCACGACGGTTATCGGGCCGGACGTACGTACCATCCCGTTTCC CCCCACCCCCATTTTTTTTCTCGTTACCCCCGCCGCCGCCTCCTCTTAATAATATCTCCG CCCCCCCCGCGGTGCCTGTTTATCTCCCATCGCGCCCGACACAAAACAAAGTTTATTCTT TTGT |
| GenBank Accession | AL941230 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:6230815 - go to primer design |
| BLAST e Value | 7e-12 |
| Hit Clone Code (BAC ID) | MRC8 |
| Hit Gene Code | At3g18180 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Glycosyltransferase family 61 protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g16340
| Sequence (A. th genome BLAST matches underlined) | >79-K014576-022-255-G10-8409 GATTTCCTGACATGAAGCACTTTACAATTGGTAAAGAAGAGAAGGGTTTGTTTATTTATG CATTTTGATTTGGTAGCCGTTTAAAAAATTTCGGAAAATAAAAAGAAAGCGTGAGGAATA TGCGGGCTGAGTGGGTAAGAGCTATGGGATCCTCC |
| GenBank Accession | AL941229 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr3:5539872 - go to primer design |
| BLAST e Value | 8e-24 |
| Hit Clone Code (BAC ID) | MYA6 |
| Hit Gene Code | At3g16340 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | pleiotropic drug resistance 1 |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
|
Last Updated on 10.06.2021 13:37 |
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