SimpleSearch - Line and FST details
Line specific information
| Line ID | 256F07 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N424547) |
| Segregation Analysis | 50:35:25 |
| Confirmed for Hit | At2g39030 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At2g07669
| Sequence (A. th genome BLAST matches underlined) | >54-K014917-022-256-F07-8409 CTGATCCATTGTAGATTTCCCGGACCATGAAGCATTTACAATTGAACTACATGTTCTGTT CTTCCCGAACTACCCAAGTTTTCTATGGGATCCTCCCTTAAGTGAGGGAGTGCTGATATG ACACGCCTCTCATGTTGAGACTACCCGCGTAGGCATCCTCCCTATCACGACGGGTAAGCC GTGTGACCGGTTAAGGGTTGCTTGCTGCTCAGCTGTCTTTAGTCAATATCTTATGAATGT TCCGGTCCAGGGAATAATGTGAATGTAGCTATGGGATCCTCCCTTAAGCGAGATGGGATC ACCCTAAACCGTGAAAACGGTGTTGTGGGACAGCACAAATAGCGTCGCGCTGCTA |
| GenBank Accession | AL941335 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:3282813 - go to primer design |
| BLAST e Value | 1e-47 |
| Hit Clone Code (BAC ID) | T17H1 |
| Hit Gene Code | At2g07669 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | hypothetical protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
Gene hit T6J4
| Sequence (A. th genome BLAST matches underlined) | >54-K014920-022-256-F07-8409 TTGATCCATTTGTAGATTTCCCGGACATGAANGCCTTTACAATTGAACTACATGTCTCTG TTCTTCCCGAACTACCCAAGTTTTCTATGGGATCCTCCACTCACATGAGCAAGGCACTGT TGTGCGCAGCACTTGCCACACAGAAAGACTGATCGACTGTAGTTACTAAATGTGTGACAT TCGGTTTTTCCCTCCTAACAAGCGGATCTCGTATCTTCGACGCTAGACGGATCTCGGACT ATCGATCATGATATATTTGCCTATGAATAATACCAATGGGATCCAGAACATCGGGAAGGA GAAGGAGTCCTCGACCCGCGGCAAATTGAGGAGGATATATTCGATCACATAGTATGGGCT |
| GenBank Accession | AL941336 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr1:4599372 - go to primer design |
| BLAST e Value | 1e-13 |
| Hit Clone Code (BAC ID) | T6J4 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At2g39030
| Sequence (A. th genome BLAST matches underlined) | >54-K014920-022-256-F07-8409 TTGATCCATTTGTAGATTTCCCGGACATGAANGCCTTTACAATTGAACTACATGTCTCTG TTCTTCCCGAACTACCCAAGTTTTCTATGGGATCCTCCACTCACATGAGCAAGGCACTGT TGTGCGCAGCACTTGCCACACAGAAAGACTGATCGACTGTAGTTACTAAATGTGTGACAT TCGGTTTTTCCCTCCTAACAAGCGGATCTCGTATCTTCGACGCTAGACGGATCTCGGACT ATCGATCATGATATATTTGCCTATGAATAATACCAATGGGATCCAGAACATCGGGAAGGA GAAGGAGTCCTCGACCCGCGGCAAATTGAGGAGGATATATTCGATCACATAGTATGGGCT |
| GenBank Accession | AL941336 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:16298658 - go to primer design |
| BLAST e Value | 3e-08 |
| Hit Clone Code (BAC ID) | T7F6 |
| Hit Gene Code | At2g39030 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |