SimpleSearch - Line and FST details


Line specific information

 
Line ID 256F10
Vector Used pAC161
Line Availability available as T3 set from NASC (N424550)
Segregation Analysis 50:31:27
Confirmed for Hit At3g47750
Parent of DUPLO pair none
Parent of pair(s) 43462, 84883, 84884, 84885, 84886, 84887, 84888

Gene hit At1g03920

 
Sequence (A. th genome BLAST matches underlined) 
>78-K014920-022-256-F10-8409
TTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAAATCGATGTTGACCGTAGGA
ATGAACGCAGCTTGCATTTGGTAAATCTTTTCCCATTGGACACCTTCTAACCAAAGATGT
GCCTGCATGTGACATTTTGTGGTTTGGATCAACTCGACTTATGACATTTGTGGGCTTAAA
TCTTTTCAACTTTTAACTATATATTGTAACTTTTACTATAGAAGAAAAAAGGAGAAAGAT
ACCTTAATTATGGGAGGCACGCAGTAGAGCCTTATGGGATCCTC
GenBank Accession AL941342 [GenBank]
Graphic View Graphic view of gene At1g03920
Predicted Position of Insertion Chr1:1003472 - go to primer design
BLAST e Value 9e-101
Hit Clone Code (BAC ID) F21M11
Hit Gene Code At1g03920 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein kinase family protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At3g47750

 
Sequence (A. th genome BLAST matches underlined) 
>78-K014917-022-256-F10-8409
TTGATCCATGTAGNATTTCCCGGNACTGAAGCCATTTANCAATTGATATATCCTGTCCAA
TTGAACATAATTAAGATATGTTGACTTTACTTGAGCAAATTTTTTGTTTAAGTTTAAATG
CAATCTGAGTGCATTTCATGTTGCAAGTTTTATTAAAAATAATATTTCTTGGGCATCACT
CAAAGCTATGGGATCCTC
GenBank Accession AL941341 [GenBank]
Graphic View Graphic view of gene At3g47750
Predicted Position of Insertion Chr3:17607481 - go to primer design
BLAST e Value 9e-61
Hit Clone Code (BAC ID) T23J7
Hit Gene Code At3g47750 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ATP binding cassette subfamily A4
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37