SimpleSearch - Line and FST details


Line specific information

 
Line ID 257G10
Vector Used pAC161
Line Availability available as T3 set from NASC (N424658)
Segregation Analysis 50:48:46
Confirmed for Hit At5g03290
Parent of DUPLO pair none
Parent of pair(s) 3886, 3889, 4129, 7182

Gene hit At1g09633

 
Sequence (A. th genome BLAST matches underlined) 
>79-K014918-022-257-G10-8409
AATGAGATCCTCATAGCTATGGGATCCGTCCCTTTACATGAGTAATATTCATACTTGATA
GCTTATATTGGGGGCTGGTAACGAATTAATGAAGCTATGGGATCCTCCC
GenBank Accession AL941450 [GenBank]
Graphic View Graphic view of gene At1g09633
Predicted Position of Insertion Chr1:28739831 - go to primer design
BLAST e Value 1e-22
Hit Clone Code (BAC ID) F14G6
Hit Gene Code At1g09633 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation long noncoding RNA
Insertion Classification TS2TE
Confirmation Status unknown

Gene hit At5g03290

 
Sequence (A. th genome BLAST matches underlined) 
>79-K014921-022-257-G10-8409
NTGATCCATGTAGAATTTCCCGGACATGAANGCCTTTACAATTGATCTTTCACATTGGAT
GCATAAATGATACTCTTTAGCCCGTAAATGATGAAATTGGAATGATATATTGTTTGAAGG
ACCAACCTTTCCAGCGATATCAGGTGCAGAACCGTGAACTGCTTCAGCAAGGGCTACACC
ATCTTCTCCAATATTACAACTGCGTCAAAGATAATAAGGCCTTAAGATGATGTAGCTCAT
AATCATACTAAAGATCACTATTACACAAGATGAAGGAACAAGTGTTTTTACCTTGGAGTC
AATCCTATGGGATCCTC
GenBank Accession AL941451 [GenBank]
Graphic View Graphic view of gene At5g03290
Predicted Position of Insertion Chr5:795686 - go to primer design
BLAST e Value 1e-142
Hit Clone Code (BAC ID) F15A17
Hit Gene Code At5g03290 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation isocitrate dehydrogenase V
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37