SimpleSearch - Line and FST details


Line specific information

 
Line ID 259A08
Vector Used pAC161
Line Availability available as T3 set from NASC (N424776)
Segregation Analysis 50:48:43
Confirmed for Hit At1g42470
Parent of DUPLO pair 344
Parent of pair(s) none

Gene hit At1g42470

 
Sequence (A. th genome BLAST matches underlined) 
>57-K014923-022-259-A08-8409
TTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGACATT
TACGACCGAAAGCGGAAAGAGACACTACAGATCCCCGGGTCTATCCTAAAATAGCCAATG
ATTCTTCTATGCTTGAGATGAACCTATGGGATTCTCCATAGAGCGAGTCTTGCTCTTGCC
TCTTGACGCATCAACCTGGATGCACATATAATCAACACCGACCTGTCGATAAGAATATTG
CCCGTAAAACGAAACAAAAATTTAGAACATTCTCGAAGAACGTATGCACAGCATCATATA
TACAAATTTGAAGCTGCACAGCCATATTATGAATTGGAACCGATCTTATATCCAGAAAAA
AAAAAGGTACTACTTGCCATTATGAATAAGAGTCGATTACATCCCAACGGGCCTAAAAAA
TCCTACCGAGCCCAGGACAGAAAGCATGACACGTACAACCCCAGATAGA
GenBank Accession FR806682 [GenBank]
Graphic View Graphic view of gene At1g42470
Predicted Position of Insertion Chr1:15930838 - go to primer design
BLAST e Value 5e-19
Hit Clone Code (BAC ID) F7F22
Hit Gene Code At1g42470 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Patched family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL941571 [GenBank]


Last Updated on 10.06.2021 13:37