SimpleSearch - Line and FST details


Line specific information

 
Line ID 259D11
Vector Used pAC161
Line Availability available as T3 set from NASC (N424815)
Segregation Analysis 50:45:33
Confirmed for Hit At2g27315
Parent of DUPLO pair none
Parent of pair(s) 77604, 77794, 77898, 77902, 77908, 77911, 77912

Gene hit At2g27315

 
Sequence (A. th genome BLAST matches underlined) 
>84-K014916-022-259-D11-8409
TTGATCCATGTAGATTTCCCGAGACTGAAGCCATTTACAATTGAATATATCCTGCCGAAC
GATGCTCGCTTTACTCCCCGTGGGGCTTGTCATGTTGAACTATACACCCAACTGATTCAG
CATAAGCAGACTATAGCTCTAGGGAACTGAACTCCTGTGCGCCGGACCCCCACCTGAGTG
ACCTACTGAGCCACAGATTGATACTGAACCCCGACCGGGCAATGTATAAGGGCTATGGGT
ATGCCTCCCTATACCTATGAATTCTAAAATTTCTTCCATATCTAAAACCATCCCAAGAAT
CTAAGTCTAAAGTCTAAACCAAAGCCAAGACAAACGAAAGGAAAAAAGAAGAAAGATGGG
AAGCAAAGCTATGGGATCCTCCCTTTAAGNTGAGANNNNNNNNGNGGNNCCNTTTTTGNT
ACACAAGGAGTANNTGAAATGCAAAAACCCCCGATGTTTCCAGGACTTTTCCAACCAGGC
TCACCCGTTGATCTTGTAAAATGTATGTCCGCTCTCTCCCACGTTGAAGGGAGGGTGCTC
GAACTCTCTAAAGGAATCTTTTCCGGCCAATTTGGACCATCTTGAAGGCCCTTGTTGCAA
GGGCGCCCTCCGCCTTAGATGCCCCCCGGGGGGCCGGAAAGGGGTCCGGGGGAAACCCGG
TTTTCCGCGCCCCTCCCGGAGGGAGATAAGCCCCCCGCCGGGTCCCCAAACCGCCCAGGG
CTGACCTCAAGGCACGACCGGCTGGCCCCCCCCCCAGATGCCCCCTAGTTGGACCCGCGA
CACGCCCTTCCCGCCGCCAAGCGGCCGCGCGGGAATACGCCACAGCCGCCGCCGTGGAGC
CATCG
GenBank Accession AL941619 [GenBank]
Graphic View Graphic view of gene At2g27315
Predicted Position of Insertion Chr2:11689898 - go to primer design
BLAST e Value 1e-47
Hit Clone Code (BAC ID) F12K2
Hit Gene Code At2g27315 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation egg cell-secreted-like protein (DUF1278)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL941619 [GenBank]


Last Updated on 10.06.2021 13:37