SimpleSearch - Line and FST details
Line specific information
| Line ID | 260F08 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N424932) |
| Segregation Analysis | 100:95:71 |
| Confirmed for Hit | At5g35410 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 4309, 4436, 89886, 89908, 89948, 89966, 90003, 90018, 90050, 90065, 90089, 90102, 90103, 90104, 90107, 90112 |
Gene hit At5g35410
| Sequence (A. th genome BLAST matches underlined) | >62-K014949-022-260-F08-8409 TTGATCCATGTAGATTNTCCCGGACATGAACGCCTTTACAATTGAATATATCCTGTCTTC AAAAACTTGTACTTCAATTGTTAAACTAAAACCTCAGTATCTGTCTTAGCTAAAGTTACT TTTACTTGTTTTTCATTAAGTTGACCTGTCAATTGCACTTGTTCACAGGGCAGTTATGTA GCGGAGAATGTAGAGAGAAATGATGAAGGGCCCCTGATGATGAATGCCTTTGAGATGATT ACCTTATCACAAGGCTTAAATTTATCTGCACTATTTGACAGGCGACAGGTAGTACCTGAT TTTCTATTACTGGTCATAGAGATCTCCATTTCGAATAAAAGAATGTCGGTAGCATCTATT CTTCAGACTGCCCGTTTTGACTGCCTTATGATGCTGTGTTCTTAGTTTGTTATAATAACT ATAAGTTCATTAGATGATTGGTTGCATGGCATTAGTAGATACAAATGGAATCCAAAATGT TCCTGCATATTGATGGCTGATCCTTTGATCTCGCAGGATTTTGTTAAAAGGCAAACCCGT TTTGTTTCTCGAAGGGAACCTATGGGATCCT |
| GenBank Accession | AL941773 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:13636868 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | K21B8 |
| Hit Gene Code | At5g35410 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Protein kinase superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T3F17
| Sequence (A. th genome BLAST matches underlined) | >62-K014924-022-260-F08-8409 TTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATATATATTCTGTAA TAGAGTATGTTCCAACGCGAAGATTTGGCTAAACAGGTATTGGGCTATGGGATCCTCCCT ATAGTGATGATATGCACTTACGCGTTCATTATGGCCCCGTGTAACGAGGACCTCATTTCT CTATCCTCACTTTACACACATAGCTTGACACTGTATTCTATTGCCTAGGTGAGACCTTGC TATAGCCGCAGCGATTCAAGCTTTGGGATCCTCCCTATATGGTCCACTGTAGGCACTTGA GCTTCATCATTACGCATCGTAGGAAGCCTTGAGCCCATATTATAAGACTGACCTCTAAAG CTA |
| GenBank Accession | FR806719 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:18998979 - go to primer design |
| BLAST e Value | 7e-18 |
| Hit Clone Code (BAC ID) | T3F17 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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