SimpleSearch - Line and FST details


Line specific information

 
Line ID 261A05
Vector Used pAC161
Line Availability available as T3 set from NASC (N424965)
Segregation Analysis 50:48:45
Confirmed for Hit At1g51810
Parent of DUPLO pair none
Parent of pair(s) 6722, 10737, 10750, 10751, 10756, 72982, 73041, 73207, 73250, 73321, 73382, 73384, 73386, 73388, 73392

Gene hit At1g51810

 
Sequence (A. th genome BLAST matches underlined) 
>33-K014950-022-261-A05-8409
NTGATCCATGTAGCATTTCCCGGACATGAAGCACTTTACAATTGAATATATCCGGACATA
TTGAAGCTCTTGAAATGGTTACTAACTTTGGCATGGAGGATAAGTTTTCAGCTGCCCTAT
GGGATCCTCCCTATAGTGAGAGAATGCTTACGAAAGGAGACATCAAAAGTATTACTGATC
CAAATCTCCTTGGAGATTATAATTCTGGTTCTGTTTGGAAAGCTGTTGAACTATGGGATC
CTCCCTACAGTGA
GenBank Accession AL941814 [GenBank]
Graphic View Graphic view of gene At1g51810
Predicted Position of Insertion Chr1:19227437 - go to primer design
BLAST e Value 1e-44
Hit Clone Code (BAC ID) F19C24
Hit Gene Code At1g51810 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich repeat protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At4g00650

 
Sequence (A. th genome BLAST matches underlined) 
>33-K014925-022-261-A05-8409
CCGGACCTGAAGACCTTTACAATTGAATATATCCGGACATGTTGAAGTTCTTGAAATGGT
TTATACCTTTGGCATGGAGGATAAGTTTTCAGCTGCTCTATGGGATCCTCCCTATAGTGA
GAGGATGCTTACGAACCGGAACAATAAAACTATTCATCGTACCAATGTTCATAAAGATCA
CTAATCTAGTTCTGTCCCTCAAGACAAGATTCTCCTGATATCCTGCCGTCAAAAATCTTA
TATTATATACCCTATGG
GenBank Accession AL941813 [GenBank]
Graphic View Graphic view of gene At4g00650
Predicted Position of Insertion Chr4:270388 - go to primer design
BLAST e Value 1e-22
Hit Clone Code (BAC ID) F6N23
Hit Gene Code At4g00650 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation FRIGIDA-like protein
Insertion Classification TS2TE (3')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37