SimpleSearch - Line and FST details


Line specific information

 
Line ID 261B09
Vector Used pAC161
Line Availability available as T3 set from NASC (N424981)
Segregation Analysis 50:32:27
Confirmed for Hit At3g61900
Parent of DUPLO pair none
Parent of pair(s) 1436, 8118

Gene hit At3g61900

 
Sequence (A. th genome BLAST matches underlined) 
>66-K014925-022-261-B09-8409
TTGATCCATGGTAGATTTCCCGGNACATGAAGCCTTTACAATTGAATATGTCCTGCAAAG
CTATGGGATCCTCCCTATAGTGAGACGTGGAAGTTTTTCGATATGTTCAAGACATGATCA
ACAGAGAGAGATCGGTTAATTACCACAACAACCATCATGATCATCGTCATAATCAAAGTC
ATAATCATCTTGTTGGATGTTTTAGAGCTTGATGATGATGATGATGCAAGCAAGCAAACG
GGGTGTAAAAATTTGCGTTTCATATTTAGTTTCTTCTTTTTGTTTTGTTTTTCCTTTCTT
TTCTAATGGGTTTGATCTTGTGGAGTTGTGGAGCCAAACACGGCCTAACCCACAAGATTA
GGAGTAGAAGTTCTATGGGATCCTCC
GenBank Accession AL941831 [GenBank]
Graphic View Graphic view of gene At3g61900
Predicted Position of Insertion Chr3:22926066 - go to primer design
BLAST e Value 2e-64
Hit Clone Code (BAC ID) F21F14
Hit Gene Code At3g61900 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation SAUR-like auxin-responsive protein family
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit F3C3

 
Sequence (A. th genome BLAST matches underlined) 
>66-K014950-022-261-B09-8409
NTTTGATCCATGTACGATTTCCCGGACATGAACGCCTTTACAATTGAATATATCCTGCAC
ATCTTTGTGATTTTAATTTGCTTGACACCTGGTATGTCAGTGTATAAGCATGAACACACT
CGCCCATCTTATAAATCAGTTATGTAGCATGACATACTATAATACATTTTCGTCACATTC
AAAATCATAATTATTTTGCTGGAGCGTAATAATAGCACCATGATACTGATGACTCAAGGA
AGCGATCGGAGAGAAGTATTTGATCTTTGAAAAAGCATGCACTGTTTGAGTTATGAGTGT
CACTCATATGCCAAAGGCCGACGCTTATGACGTTTTAGCTTATCAAACATTGATAGTATC
CGTAATGGAGCATTCTGCCTGACTGCATCTATGTGC
GenBank Accession FR806730 [GenBank]
Graphic View Graphic view of sequence FR806730 of line 261B09
Predicted Position of Insertion Chr1:11551213 - go to primer design
BLAST e Value 7e-12
Hit Clone Code (BAC ID) F3C3
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37