SimpleSearch - Line and FST details


Line specific information

 
Line ID 261E09
Vector Used pAC161
Line Availability available as T3 set from NASC (N425017)
Segregation Analysis 50:35:26
Confirmed for Hit At3g46400
Parent of DUPLO pair none
Parent of pair(s) 1295, 10730, 10736, 10752, 72897, 72998, 73027, 73056, 73117, 73142, 73171, 73197, 73223, 73244, 73266, 73315, 73356, 73417, 73436, 73467, 73480, 73493, 73506, 73516, 73537, 73547, 73570, 73576, 73580, 73584, 73588, 73589, 73590

Gene hit At3g46400

 
Sequence (A. th genome BLAST matches underlined) 
>29-K118470-0022-261-E09C-35St
TCCACTATCTTCGCAGACCCTTCCTCTATATAAGGAAGTTCATTTCATTTGGAGAGGACA
GGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCGGTTTAAACTATCAGTGTTTGAAA
TATTAATTACCTAATTATTAACGCAACAATTTATATATTATAAGGTGTCATGGATATTGT
TGTCTCACTAGATTGTTATTTGCATATATCTATCCCCATCAGTAATTTTGCCAACAATGG
ATATTATGTCCAAGACTATATCCGAACAATTAATCAAGACAAAAAGGAGAAGATTTGCTT
ATTCAGAAGTTGTAGAAATGACAAAAAAATTCGAAAAAGCTCTAGGTGAAGGAGGGTTTG
GCATAGTCTACCATGGTTATCTGAAAAATGTAGAGCAAGTAGCGGTTAAAGTACTATCAC
AATCATCATCGCAAGGCTATAAACACTTCAAGGCAGAGGTATGATATGCCATAGATCTTC
CTACAATATGAAAAGAAAAAAAATCACACAAATGTATTTTTGTTTTATATATTTCACATC
ATGTCAAACAAATGTGTTTTGTTATTGTTGGTTTGTAGGCGAAAACTTCTT
GenBank Accession HG968850 [GenBank]
Graphic View Graphic view of gene At3g46400
Predicted Position of Insertion Chr3:17075603 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F18L15
Hit Gene Code At3g46400 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich repeat protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit HG968850 [GenBank]


Last Updated on 10.06.2021 13:37