SimpleSearch - Line and FST details


Line specific information

 
Line ID 270A07
Vector Used pAC161
Line Availability available as T3 set from NASC (N425831)
Segregation Analysis 50:42:27
Confirmed for Hit At1g33930
Parent of DUPLO pair none
Parent of pair(s) 85443, 85451, 85473, 85476, 85478, 85480

Gene hit At1g33930

 
Sequence (A. th genome BLAST matches underlined) 
>49-K015063-022-270-A07-8409
GATCCTGACATTTCCCGGACATGAAGCCTTTACATGGTGTTTTCTTAAATTCCTTCTCTT
CCCTGTTAACCCTTGCAGCCTCTTCCTGACAAACCGTAATTTATGAAGCATTAACAAGTT
TTCTATTGGACAAGGACGAGAGAGCGATGATTTATATGGAATGCATCACATCACCATCAA
CTATAGGTCCACCTGTATCCTACGGTGCATCGTGTACCATAAAGGGATTCCCGCCAGTTT
CCTTTTCAATCACTGCTACATGGACCAGAAGCTGCTGGACTTGCTTATCCTTCACACCTT
CATCTTTCGTGCAGGTATCAAATTCCACCCTTCTGCCTCCACATAATCTGAGAACATTCT
GAAATTGAATGATCCACTCCGAAGATTTAGATTATTGACGAGACGGGAAGAACCCTTGGA
CAAATAATCAAACTCTGACATTTAAAAATTCAGGGCAACCATTGAGACAATAATCTTCTA
AAGCCATATTTCGATCATCCNACATATCACCGCAAGGGAATACAACGATCTATGAGTCAA
CGATTTTACCCCGCAACAACATCTGTCACGTACGAAGCGCGGTTTCTTCCTCTTGTGAAA
AGCGAGTCGAGAAGGATAGAACTATACGCCCGAAATTGTAGCCCTTCTCTATGGGATCCC
CNCCAAAGAAGAGGAGAAAAAAGNNNCGGGATTCCGCGTTGTTTGTGAAAAGAAAAAAGG
GGAAGGCCCGGCCAGTAATATGAAAAATGGCGGGGACGAGTGGGAAANTCGTAGGAGAAG
AGCAAAATAGTGACAANCTCGGATGGAACCCAGACAGATAGAGGGATCGAAACAAAAGGA
GGACGGAAAAGAGAAACAAATGGAGA
GenBank Accession AL942900 [GenBank]
Graphic View Graphic view of gene At1g33930
Predicted Position of Insertion Chr1:12326728 - go to primer design
BLAST e Value 5e-179
Hit Clone Code (BAC ID) T3M13
Hit Gene Code At1g33930 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation P-loop containing nucleoside triphosphate hydrolases superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37