SimpleSearch - Line and FST details


Line specific information

 
Line ID 270F06
Vector Used pAC161
Line Availability available as T3 set from NASC (N425890)
Segregation Analysis 100:78:52
Confirmed for Hit At4g34980
Parent of DUPLO pair none
Parent of pair(s) 675, 5476, 5508, 5534, 5650, 72311

Gene hit At4g34980

 
Sequence (A. th genome BLAST matches underlined) 
>46-K015063-022-270-F06-8409
GCGAGAATCATTCCGACGGCTCCTGCTTTACTTCAGAACCCCTCCTTTGGCTACGCGTGG
ACTGCTTCCTCTAGCGCATATCACTATTTTACCCCTCACTTGCTTAGGATCCAACGTGCT
CTCCCTACATAGAGACGCTGATGACATTCCCGATTTACCGGGATAAACCACCGGAAACGT
ACGACCGTTTAAAGGTACTCCAGCGTAAAGAGACACTCCTCTGAGACGATGTCCGTCGCC
GAGAATAGCATCCCCTGGGAAATTCCGATCGATTGTGCTATGGGATCCTCCCCTATAGTG
AGCATCACTCTTCGCGAACGTGACAATTCCGAGACAGAGATCTGAGGAGGGGAATGGAAG
AACGGCTAACCGGATTACATTNAACGTGGAAACNCTGCAATTACGCCTCGGTCGTATAAG
ACGAAATCTGATGAAGGCNTTGGAGGAAAAAGGGCGGGTGCGGGATCCAGGAGGATTGAC
GAGGGTTTTCGTGCATGAAAATGAGGTGGAAAGACGACTTAGTATTAACTGTGCACGCGG
AGGTGACGAGAGGAGTCTGGTAAGGCCCTCAATTGGCAAGGTTTGGCCCCAGGGGAAATT
GGGGACCCTCGACGCGATCCTAACGGATACGGGGAGAGAAGGAAANGTGCTGCGNNAGCG
CGGGGCAGTGGGGAGAACAAGAGG
GenBank Accession BX890918 [GenBank]
Graphic View Graphic view of gene At4g34980
Predicted Position of Insertion Chr4:16657953 - go to primer design
BLAST e Value 1e-111
Hit Clone Code (BAC ID) F11I11
Hit Gene Code At4g34980 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation subtilisin-like serine protease 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX890918 [GenBank]


Last Updated on 10.06.2021 13:37