SimpleSearch - Line and FST details


Line specific information

 
Line ID 271C08
Vector Used pAC161
Line Availability available as T3 set from NASC (N425952)
Segregation Analysis 50:19:17
Confirmed for Hit At3g20200
Parent of DUPLO pair none
Parent of pair(s) 4542, 4563, 4578, 7357, 80904

Gene hit At4g28220

 
Sequence (A. th genome BLAST matches underlined) 
>59-K015071-022-271-C08-8409
TGTCCTGAGATTTCCGGACTGAAGCCATTTACATTGAATATATCCTGGAGCCACCACCAC
CAGCCTGTCCGAGAGAGTCGACGAGCTCTGGACACTCTATGCGCCTATGGGATCTTCCCT
ATAGTAGAGATTATATTGATGTTGCACATGGATATGTCGAACCATTCAAGTTTATGTCGC
AACACAAAATTTGGTAGAAGGGTCAGTTTATAAATCAGCACACATCCAAGGTCCAAAGCC
CACAAGAATGGCAACACTCTATTAATCCCACAAATTCAAGCTGTCCTCGGTTTTGTTTGT
TTAGCAATCGATCCAATTCACATCGAATTCAACCGGGTCAAGAACAAGCGACTATTTTGA
TTCACAGATTCCAAATGATTTTGCTCATAATTAGCCAGTTTCAGACAAATGCCAAATCTG
GAAAACAAAAAACAAAGGCAAAAACGAATAAATGAAAATGAAGTGGTTTAGCGGATAATT
TTAGAGGCTAAACTATGATGAACAAGTATGCCTCCACGTTAACACCGCAGTTCAATATAT
GCCTCGAAGACTATGGGA
GenBank Accession AL943057 [GenBank]
Graphic View Graphic view of gene At4g28220
Predicted Position of Insertion Chr4:13992861 - go to primer design
BLAST e Value 1e-142
Hit Clone Code (BAC ID) F26K10
Hit Gene Code At4g28220 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NAD(P)H dehydrogenase B1
Insertion Classification TS2TE (5')
Confirmation Status unknown

Gene hit At3g20200

 
Sequence (A. th genome BLAST matches underlined) 
>59-K015064-022-271-C08-8409
TTGATCCATGGTAGATTTCCCGCACATGAAGCACTTTACAATTGAATATATCCTGGGAGC
CCCACCACCAGCCTGTCCGAGAGAGTCGACGAGCTCTGGACACTCTATGCGTCTATGGGA
TCCTCCCTATAGTGAG
GenBank Accession AL943056 [GenBank]
Graphic View Graphic view of gene At3g20200
Predicted Position of Insertion Chr3:7049216 - go to primer design
BLAST e Value 1e-13
Hit Clone Code (BAC ID) MAL21
Hit Gene Code At3g20200 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation kinase with adenine nucleotide alpha hydrolases-like domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37