SimpleSearch - Line and FST details


Line specific information

 
Line ID 272B08
Vector Used pAC161
Line Availability available as T3 set from NASC (N426036)
Segregation Analysis 50:35:31
Confirmed for Hit At4g19410
Parent of DUPLO pair none
Parent of pair(s) 5441, 11357, 88084, 88086, 88088

Gene hit At5g67290

 
Sequence (A. th genome BLAST matches underlined) 
>58-K015091-022-272-B08-8409
ATGAGCATTGCTGATCCATGTATATTTCTGGATTGTCACCGGTTCACAGTACAGCGGCTA
TTGAGAGCTACCCTATAGTGAGACCTTTTCCCCCATAATTTATTTCAACAAGTCCTTTTC
ACTTCTTAAAACATCTATGGGATCCTCCCTATAGGGAGANNANANNAATANGACGAATTG
TTGAGCTATGGGATCCTCCCTATAGAGAGACC
GenBank Accession AL943163 [GenBank]
Graphic View Graphic view of gene At5g67290
Predicted Position of Insertion Chr5:26850066 - go to primer design
BLAST e Value 7e-18
Hit Clone Code (BAC ID) K3G17
Hit Gene Code At5g67290 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation FAD-dependent oxidoreductase family protein
Insertion Classification Promoter
Confirmation Status unknown

Gene hit At4g19410

 
Sequence (A. th genome BLAST matches underlined) 
>58-K015096-022-272-B08-8409
TTGATCCTGTAGATTTCCCGGACATGAAGCCTTGCTGATCCATGTAGATTTCTCGCATTG
TCACCGGTTCACAGTACACCGCCTATGGGATCCTCCTATAGTGAG
GenBank Accession AL943164 [GenBank]
Graphic View Graphic view of gene At4g19410
Predicted Position of Insertion Chr4:10582502 - go to primer design
BLAST e Value 6e-06
Hit Clone Code (BAC ID) T5K18
Hit Gene Code At4g19410 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pectinacetylesterase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37