SimpleSearch - Line and FST details


Line specific information

 
Line ID 272H08
Vector Used pAC161
Line Availability available as T3 set from NASC (N426108)
Segregation Analysis 50:46:36
Confirmed for Hit At1g75140
Parent of DUPLO pair 582
Parent of pair(s) none

Gene hit At1g75140

 
Sequence (A. th genome BLAST matches underlined) 
>64-K015096-022-272-H08-8409
NTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATATATCCTGACCCC
CACGATACTTACTCTCCTGTGCGGTTGTTCTGTAGTTAGTAGTTTCCACTGGAGCTCTTG
AGCTCGGGTCGTTAGACCCTACTGAACGGTAAGCACCTGTTGCTGCTCCAGGAGGATACC
GAGATGGCGAAACGTATCTTCTCCGAAGATCCATGTGGTCGTCGTTTCTCCTATGGGATC
CTCCTTNAGGTGAG
GenBank Accession AL943252 [GenBank]
Graphic View Graphic view of gene At1g75140
Predicted Position of Insertion Chr1:28202242 - go to primer design
BLAST e Value 2e-89
Hit Clone Code (BAC ID) F9E10
Hit Gene Code At1g75140 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation membrane protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At4g02670

 
Sequence (A. th genome BLAST matches underlined) 
>64-K015091-022-272-H08-8409
TAATACCCTCGTGGACAAAAAAAAGGACTCTAGGTTTTCTTTCTGGGGATTTTTACATTT
TCTAAAATTGTGGCTATGGGATCCTCCCTATAGAGAGAAAGCTGTTCGGGCTATGGGATC
CTCCCTATAGTGAGACCTTCTTAATAGATCCCTTGGCTCGTCTGGGTAAGCTATGGGATC
CTCCCTATAGTGAG
GenBank Accession AL943251 [GenBank]
Graphic View Graphic view of gene At4g02670
Predicted Position of Insertion Chr4:1176133 - go to primer design
BLAST e Value 1e-09
Hit Clone Code (BAC ID) T10P11
Hit Gene Code At4g02670 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation indeterminate(ID)-domain 12
Insertion Classification TS2TE (3')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37