SimpleSearch - Line and FST details
Line specific information
| Line ID | 277E09 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N426553) |
| Segregation Analysis | 100:100:91 |
| Confirmed for Hit | At1g07150 |
| Parent of DUPLO pair | 2555 |
| Parent of pair(s) | 1642 |
Gene hit At1g07150
| Sequence (A. th genome BLAST matches underlined) | >69-K015121-022-277-E09-8409 NTTTTGATCCATGTAGCATTTCCCGGACATGAANGCCTTTACAATTGAATCTATCCTGAC ATGTATTATGACACACTAGAAACGTCAATTAGTCAGTCGAATCACCACTCTCGTCATCGA TTGGATCCGATGATGTGTTATATTCCGATTCTACCCTTGTGGATGCCGAATATTCCATTG TTGTCCCTTCCTCTTCCGAAGCGTGGCATCTAACTTCCACCCAACCATCTGACTCCCAAA TTACTCCTCCGGTCGTCGCCAAATTACAAATTATTGCCTTCGCCGCGTCTTCGAATTCTG ATCTCCCTACTTCCTCTTCTTCTTCTTCTAAGTCAAACCCCGAGTTGACCCAGTCAAGTA CGCAACGCGGAGATGACTCAGTCGGAGATGAGTTGTGACACTGAGAGAGAAATGGATGCT GCAAAAGCTGATCGCAACTCCACCTCTGATTCGGGTCTCGCTTCAGACACTTTTCTATGG GATCCT |
| GenBank Accession | BX942921 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:2194594 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F10K1 |
| Hit Gene Code | At1g07150 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | mitogen-activated protein kinase kinase kinase 13 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | BX942921 [GenBank] |
Gene hit At1g53380
| Sequence (A. th genome BLAST matches underlined) | >69-K015155-022-277-E09-8409 NTGATCCATGTAGCATTTCCCGGACATTGAAGCCTTTACAAATGGTGGGGTAGAGTTGTG TTTATGTTTTTTTTTTTCCGGCCTTTTGAGCTTGGCCCCATTTCCTTCAAAAACCCCGAG GCCATCTTTTACCGGGGGCCCATGGAACCTTATCCCTTTTTAAAAAAAAACGGAAAAATT CCTTTCTGTTTCTAACCCTCCTTGGAAAAAAACAAACAAGGGACCGACTGGGGGAAACTC TCCCAATTTTTAGGGGGATTAAAAAATTTCGCCTTCGACGGAAATTCAAATTCTTTTCTC CCT |
| GenBank Accession | AL943860 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:19913211 - go to primer design |
| BLAST e Value | 3e-07 |
| Hit Clone Code (BAC ID) | F12M16 |
| Hit Gene Code | At1g53380 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | hypothetical protein (DUF641) |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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