SimpleSearch - Line and FST details


Line specific information

 
Line ID 277G04
Vector Used pAC161
Line Availability available as T3 set from NASC (N426572)
Segregation Analysis 50:48:43
Confirmed for Hit At3g05790
Parent of DUPLO pair none
Parent of pair(s) 3119, 9708

Gene hit At3g05790

 
Sequence (A. th genome BLAST matches underlined) 
>31-K015155-022-277-G04-8409
NTTTCTGATCCATGTAGGATTTCCCGAACGTGAACGCCACTTTACTATGTAATATATTTC
TGACTAGACACAGAAGAATACTGTGACATAGACTTCACTACGTGCGTGCTGCTATAACCT
AGTCTATCTTCTGACCTTGACCCACTTATCTATAACATTATTGATCCGCACAGCGGACCC
ATGTATCTGGAACCTGTAATCTACCTATGAGCTCTTGCGGTGCGAATGAACACTTACACC
GCCAATCGCCAGGTTTCTACTCTTCAAAGAGACTTCTCCAGTCATTGCAAGATCCTTCCT
TACAGGCTTCTTCAAGGCAAGCGATAGCAATGAAGTTATCATGGTGCAGCCTGCGCTTGG
GCCGTCTTTTGGTGTGGCTCCTGCAGGTACATGTAGATGAAGCTTGGAATTCGCAAACAA
CTTGTTCTCGGGCTCTTTCTCCAGCATTATTCTTCTTGCGACTGCGCGAACTATCTCTGC
GCTTTCTTTCATTACATCCCCAAGCCGACCCGTTATATTGAAGACCACCTTTGCCTTCTC
CTTATTCCACAACGGGTGTCTCTATGTACCATGT
GenBank Accession AL943890 [GenBank]
Graphic View Graphic view of gene At3g05790
Predicted Position of Insertion Chr3:1720256 - go to primer design
BLAST e Value 5e-145
Hit Clone Code (BAC ID) F10A16
Hit Gene Code At3g05790 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation lon protease 4
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL943889 [GenBank]


Last Updated on 10.06.2021 13:37