SimpleSearch - Line and FST details
Line specific information
| Line ID | 278B08 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N426612) |
| Segregation Analysis | 100:98:80 |
| Confirmed for Hit | At5g65510 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At5g65510
| Sequence (A. th genome BLAST matches underlined) | >58-K015156-022-278-B08-8409 TGATCCATGTAGATTTCCCGGACATGAAGCCCTTTAATAGGATTATATAACGTGCATCTT CTTGCCTGTCCCACTGTAATGAGAGATGTCAGACTGTATTTACGGCGGTAATAAATACAA AGATCCTTGCTGGATCATTTCGCAGAGAGTACTAACCCCTCCTATGTATTTACTTCATTC TATGCGTATTATTGTTAGTCCTTTCTGTTTAAAATCGGGGTCTTTCCTTGACATTATGCC CATATACCTTAGGCTATCAATCATCATGAAGAGTATACATATCACCTAGGAGGAAGGACT TTTCAGCTGTTCATATGTATTGAATCCATTGCATGCATTGCTCTTGGCACTCTTTCTTTG ACAAAACCTTTGTACTGCTTCCGCTTTTGTTTTCCCCAACCATAAAAGTTAAAGAATAAA TGTTTGTTTTTAACCCAAGTCAAACTATGGGATCCTGCCTTGAGCGAGC |
| GenBank Accession | BX890932 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:26187819 - go to primer design |
| BLAST e Value | 1e-99 |
| Hit Clone Code (BAC ID) | K19O4 |
| Hit Gene Code | At5g65510 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | AINTEGUMENTA-like 7 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g10010
| Sequence (A. th genome BLAST matches underlined) | >58-K015122-022-278-B08-8409 TTGATCCATGGTAGATTTCCCGGACATGAATGCCTTTAGCATGGGACTATATCACTAGAC TTCTCGCCTCTGCAAACTGTAAAAAAAGATAATCAAACAGTTTTTAAGGCGGGAATAAGT AGAAAAATTCTTGCTAAATCATTTTGCAAGAGTTACTAACCCCTTCTATGGGATCCTCCC TATCATGAGAGGCCGGGAAGTACATTGATGCGCCAAAACGATGATGTGCGGTATTTGAGA GCGAGTGTACCTTATGCGACGAGGTGCGTTGGAGAGCATGCATGCCGACGCGGGAAGAGG AGTCGGAGACTGTCCGAGGAACTGTATGGGTAGGATGCTGGTGGACAATTACCAGGAGAA TAGCTCTAAGTAGAAATATGAGGACGGTATCAAAATGACTAATGTGATTGGTAACAGATA CCTTGCAGAGCAGCAATGAGAGGTGGATTCCCTGTGAATGGCACATACTTCCAAACTAAT GAGGTGATTTTCCCAGGAATGAATTTAACTTAAGCAGATGATCAAAAGCACCATTCTCGT CAAAGCTCGATTGGGACTATACTTGTGCAGG |
| GenBank Accession | AL943938 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:3083083 - go to primer design |
| BLAST e Value | 5e-93 |
| Hit Clone Code (BAC ID) | T22K18 |
| Hit Gene Code | At3g10010 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | demeter-like 2 |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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