SimpleSearch - Line and FST details
Line specific information
Line ID | 279E01 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N426737) |
Segregation Analysis | 50:43:30 |
Confirmed for Hit | At1g11180 |
Parent of DUPLO pair | none |
Parent of pair(s) | 81916, 81918, 81919, 81920 |
Gene hit At1g11180
Sequence (A. th genome BLAST matches underlined) | >05-K015123-022-279-E01-8409 CTGATCCATGTAGAATTTCCCGGACATGAANGCACTTACAATTGAATATACTCTTTGCTG CAGTAGCTCCTCCTATTGACTTCAAAGGAAAATCACTTGCGTAAGTTTCGCTCACAAGCT TTAAGACATCGTCTATGGGATCGCTCCCTAGTAGGGAGCTCTATGGGAACCTCCCTGTAC TGAGACCTGAACTACGAAGACCAGCGATATGAGGAACACTATATTAGAGTATCAAATAGA CCGGACTGATAAAGACAATATACCGCCGACAGGAAGATACGCCCTAGACAACCTCGGGCT TGAGATCCTCATCATAGAGACCGTGACTCGACACATCAGCGGGAAGCTACACTCACTGAG CTAGGAGACGGCCATGGGATACGCCAACATGCGACCAAGGCGGCAAAAGAAAGCAAAGGA AT |
GenBank Accession | AL944098 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr1:3747769 - go to primer design |
BLAST e Value | 5e-31 |
Hit Clone Code (BAC ID) | T28P6 |
Hit Gene Code | At1g11180 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | Secretory carrier membrane protein (SCAMP) family protein |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Last Updated on 10.06.2021 13:37 |