SimpleSearch - Line and FST details
Line specific information
| Line ID | 281A06 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N426886) |
| Segregation Analysis | 50:40:36 |
| Confirmed for Hit | At2g36680 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 11900 |
Gene hit At2g36680
| Sequence (A. th genome BLAST matches underlined) | >41-K015201-022-281-A06-8409 TTCTGATCCATGTTAGATTTCCCGGACATGAANGCCTTTACAATTGATGACATATTACTG TTTTGTTAGTTGCTGCTAACATAGTTAAGGTGAACAAAAATTTTAGTTGTAATCATTAAA AGAACCTGATCTATGCTCATGAAGTTGTGCTGGGTCTTAAGATTTTGCAATGTTAGTATA TTGGGTATTGGAACAGTTTCAGGTAAGTATTTTTAAGATTGATGTGTTAAAAATCCAGGG GATCAAAATAACAGCAACAAGGACAATCTCGTCCTTCTCCAGAAGCTTCTGCAACACCGA GGTATTCTCCGTCTATTGTCACCTCTCCTATGGGATCCTCCCTTAGATGAGATCGAGGAA TCGGCAAATTGTCTCAAAATCGTGTTTTTTTTTTTTTTTGGCCAACGACTTTTCTTTTGC GTTGGGAACCTGGCTAAGTAATACCCGTGAAGGGGCCTTTATTATTGACCCATAACGGGG GG |
| GenBank Accession | AL944298 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:15370521 - go to primer design |
| BLAST e Value | 1e-136 |
| Hit Clone Code (BAC ID) | F13K3 |
| Hit Gene Code | At2g36680 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Modifier of rudimentary (Mod(r)) protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit F26K24
| Sequence (A. th genome BLAST matches underlined) | >41-K015199-022-281-A06-8409 NTTTGATCCATGTAGATTTCCCTGACATGAAGCACTTTACAATTGATTATGTACCCTAGC TATGGCAGAGACTTCTGTATGAAATTTCCTAAAATTTATGAAATTTGCATTTTCATTTAC ATTATTTAAACTTTTAGGATAGTAATATAGAAAAAAAGTTCAAAACAAACTTAAGGACAT TTCGAAGCAGAGTAGAGAAGCCAAAAAGTTCACCGAAGACGTCCCACACCGTCACGGTCA CAGTCACGTGTAATACACGTGGAGAGTTTTAATTGGTGACAGCATCTGAAGAGTCGTATA TGTCGCATTCTCATTAGCCTGTCACGTTTCTCAGACGAACACTCAGGGAAACATATAAAT CTGAATCCAAATAGTAATTGGAATTACAATAGAAACCCTTAATTTAGTGAAAATATCGTA ATTATCCTATCGAAAAGTGAGAAAGAGTAAGCAGAGAAATAAGCGATTGATCTCTCCTTC TGCAAGTTCTCTATTTCTTCCCTCACTTCTTCTTATTCTTCTCCCCTTTCATTGTTCTCT CTGTTCGGCGCTCTCTTCTACTTCTCTCGATCCGACCGTGAATCAATATCGGAGCAATGA CTATGATGACTCCG |
| GenBank Accession | AL944297 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:3770828 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F26K24 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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