SimpleSearch - Line and FST details


Line specific information

 
Line ID 281C04
Vector Used pAC161
Line Availability available as T3 set from NASC (N426908)
Segregation Analysis 50:49:45
Confirmed for Hit At3g15450
Parent of DUPLO pair none
Parent of pair(s) 68480, 97103, 97104

Gene hit At3g15450

 
Sequence (A. th genome BLAST matches underlined) 
>27-K015201-022-281-C04-8409
CTGATCACTGTAGATTTCCCGTGACCTGAAGCCTTTACAACTTGAAACTTACAGCCTGCA
ATAACAAAAACACAAAACACACACTCAAGATCTAAACTCAAAAGTATGTTTCTTTCTTTA
TAGGGCTAATGAAAAACTTAAGTTTTGGTTTACCATTAGGGAAAGGAGCAAACGATTTAG
CACAGCCTTGCTTTATGATCTGAATATCATCAGACATTACAACAGATCCGTCTCCAGAAA
TTCCCCAGTAAAGACTCTCTCCTCCATCAGAACTCAGAGCTGAGAAAACAGAGGAAGTTT
GAGTATCGTAGACAACGAAAGCGAAGCTTCCCTCAAGACCTCTAAGAACTTGATCTGCTG
GGTAAGGACCACGATCACGAAGTGTTCGATAAGCTTCGATCACAAACATTGCCTCGTTTG
AGTTCTTCCCAGATAAACCGTATTGTCGATTCAATGTACAGAGATTATTCAATCTCCCTA
TGGGATCCTCCCTTANGNGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGNNNNNNNNNNNNNNNNNGANNN
NNNNNNCNGNTNNNNNNNGANNAANNNACNANCGCANGNNNGCGAACGAAGCTAAACGAA
CCCTGCGGGAGGGGGGCCTTACCCAGCAAACAAGGTCTTAAGAGGCTTGGAGGGGAGCTT
CCTTTTNTTGTCTACATCCTCAACTTCCTTTGTTTT
GenBank Accession AL944329 [GenBank]
Graphic View Graphic view of gene At3g15450
Predicted Position of Insertion Chr3:5213824 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MJK13
Hit Gene Code At3g15450 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation aluminum induced protein with YGL and LRDR motifs
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37