SimpleSearch - Line and FST details


Line specific information

 
Line ID 281E12
Vector Used pAC161
Line Availability available as T3 set from NASC (N426940)
Segregation Analysis 50:50:36
Confirmed for Hit At3g28100
Parent of DUPLO pair none
Parent of pair(s) 4026, 8383, 9896, 9906, 84801, 84808, 84812
Note

Gene hit At3g28100

 
Sequence (A. th genome BLAST matches underlined) 
>93-K015201-022-281-E12-8409
CTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTTCNATTGCTCATTGGTAATTATG
TAGCCAAAGTGATGGGGACGATATTGTCGTTAATAGGCGCACTTGTTGTGGTTCTCTACC
ATGGTCCACGTGTCTTTGTTGCATCTTCTCCGCCGTATATAAACTTCCGTCAGCTTTCTC
CGCCGTTATCATCTTCAAATTCAGATTGGCTCATCGGCGGAGCTCTTCTTACCATAAGAG
ACATCTTTGTTTCTGTTTCTTTCATTCTCCAGGTACAAATTTTTGTTCTTATACATAATA
GAAATAATACAAAGTGTTGGATATGTTCCATGCAAAAGAGACTAATTTTGTTATCGGAGG
CAGAATTTTTAAAATACAACAGACTTAACCGAGGAAAATTAGTTCAACCGTAAACCCACT
GGATCCTCGAACCTATGGGATCCTCCCTTAAGTGAG
GenBank Accession AL944376 [GenBank]
Graphic View Graphic view of gene At3g28100
Predicted Position of Insertion Chr3:10458803 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MMG15
Hit Gene Code At3g28100 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation nodulin MtN21 /EamA-like transporter family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At4g40050

 
Sequence (A. th genome BLAST matches underlined) 
>93-K015199-022-281-E12-8409
TTGATCCATGTAGATTTCCCGTACGTGAATTCCTTTATAACTTGTATATATACTCTATTG
ACTTACCTGTTATGCCAGAGTATCTAGCTCGTTTATGGGATCGTTGATATGGAAGACAAA
TGCTTTTGCACTTATCTGACAAGCTTATGCTTTTGGTTGATCACAGCATATCCAATTTTA
GGGTACTTTTGATCTGACCCTTGTTGTGATTTATATTGGTTCAAGTCTCTTTTTTTATAC
ATATTTCTTCTCTTGTGTAGGAGACAAACTTTAAGGAGTGGAGGCTATGGGATCCTCCCT
ATAGTGAG
GenBank Accession AL944375 [GenBank]
Graphic View Graphic view of gene At4g40050
Predicted Position of Insertion Chr4:18563365 - go to primer design
BLAST e Value 4e-75
Hit Clone Code (BAC ID) T5J17
Hit Gene Code At4g40050 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation signal transducer, putative (DUF3550/UPF0682)
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 281D11


Last Updated on 10.06.2021 13:37