SimpleSearch - Line and FST details


Line specific information

 
Line ID 282D03
Vector Used pAC161
Line Availability available as T3 set from NASC (N427015)
Segregation Analysis 50:36:26
Confirmed for Hit At3g54980
Parent of DUPLO pair 12505
Parent of pair(s) none

Gene hit At3g54980

 
Sequence (A. th genome BLAST matches underlined) 
>20-K015177-022-282-D03-8409
GCCTCATGGAGATTTCCTTATGTATAATGTGCGGAAGTCACCGTGTTGTGGATAATGACA
TTCTTGAGTGACAGATATAATTCTTCATATCCTAAAACCTCTTAACCACATTTTACGGAT
CTGCCCCTTCTTGCATAAAACCGTTTACACCTACTGTGTGAAAGATAAAATGAAGGACAA
CGACCCACCGACCTGCATCTGGTGTCTTCAACTCAAAGTGCCAGGAGGAAATTTCAATCA
TTGAACAATCCATCTGTGCACTGTGGGATGTGCACCCAAATCACAGGGGAGGACCCGTTG
TTCAACATTAACTTGTTCACACCAAGGGCGTGCTACCGTGTTTCCCAAAATGGCGCAAAT
CCAGAAATCAGGCTGTAGTGTTTAGGGAGCGAAGAATAAAATCGTTCTTCAAAGAGTTCA
TATAACACACCCGAAGCTCTTTGCATGTTACTCCTTTTGAAAAACCCATCAGAGACTATT
ATGTTGGCCAATAAAGGCATGAAAGAAGGAGTTATACCCAATGGTGTTTCATTCAAAAAT
GTAGAGGACCCCCTTACATCGAAGAACNCNCNNCCGCGACGTTTCCCCTTCATTCCTCCC
GenBank Accession FR807164 [GenBank]
Graphic View Graphic view of gene At3g54980
Predicted Position of Insertion Chr3:20372742 - go to primer design
BLAST e Value 1e-10
Hit Clone Code (BAC ID) F28P10
Hit Gene Code At3g54980 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pentatricopeptide repeat (PPR) superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR807164 [GenBank]


Last Updated on 10.06.2021 13:37