SimpleSearch - Line and FST details


Line specific information

 
Line ID 283G06
Vector Used pAC161
Line Availability available as T3 set from NASC (N427150)
Segregation Analysis 50:37:24
Confirmed for Hit At5g56420
Parent of DUPLO pair none
Parent of pair(s) 76867, 76876, 76877, 76879, 76884

Gene hit At5g56420

 
Sequence (A. th genome BLAST matches underlined) 
>47-K015203-022-283-G06-8409
NTTCTGATCCATGTAGATTNTCCCGGACATGAAGCACTTTACAATTGAATATATCCTGAA
TTAGTTCACGCACAGAGTCGTCTAACCTATGGGATGCTTCCTATTGTGAGAACTTGTTCA
ACGCTTGCGGTTCTGAAACTCGAAAACATAACTCTTGAAGATGCTTCTTGTTATGTTTGC
TTCCAGTCGCTCAAGACTTTGCACCTTTTAGATGTGAAGTATTTAGATGACCAGTCACTT
CCTATGGGATCCTCCCTATAGTGAG
GenBank Accession AL944654 [GenBank]
Graphic View Graphic view of gene At5g56420
Predicted Position of Insertion Chr5:22852000 - go to primer design
BLAST e Value 3e-69
Hit Clone Code (BAC ID) MCD7
Hit Gene Code At5g56420 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box/RNI-like/FBD-like domains-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g73240

 
Sequence (A. th genome BLAST matches underlined) 
>47-K015178-022-283-G06-8409
CTGTCAGGCGGAAACGACTGATGTTGTCTCAACACTTCTATCGCTTTCGCTATGGGATCC
TCCC
GenBank Accession AL944653 [GenBank]
Graphic View Graphic view of gene At1g73240
Predicted Position of Insertion Chr1:27543089 - go to primer design
BLAST e Value 6e-09
Hit Clone Code (BAC ID) T18K17
Hit Gene Code At1g73240 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation nucleoporin protein Ndc1-Nup protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37